Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00019 ATGCATACCCGTGCATGTCTCTTGCTTTCTCTTGTGGGTATCCTTGTCTTGTTGAATGGCATTCATGGTGCATGGACAGAGGAGCCAGGATCATTGATCCTGGGTTGTGGGTTGGGTGAAGGAGGTGCCAAAGATGTTGAAGGAAGGCAATGGATCCCTGATGATAAGTTCCTTGAAGCACAAGGTAATTCAATCACATCCAAAGCCTCTTACCAAGACCCTTCTGTTTTGTCTGAGGTTCCATACATGTCAGCTAGAGTTTTCACATCAGAGGCAACATACAAATTCCCTGTTCTACCTGATAAACGCTATTGGCTCAGGCTCCATTTTTATCCATCTCTTTATGGCAGTCTCAACCCTTCTGATTCATATTTCTCCGTGACTGCAAATGGGGTTACGCTTCTCAGCAATTTCAGCGCCTCAATCACTTGTGAGGCCCTCTCACAAGCTTACATTGACAGAGAGTATTCCCTTGCACCTTTGAATACAGATAGTTTGACCCTTACCTTCAAGCCATCTGACAAGTACAAAGGGGCTTTTGCTTTCGTCAATGGCATTCAGTTGATCCCAATGCCAGAGTTATTTGATTCTGGTGCATTGGTTGGGTATGCTGACCAAACCGTGGATGTCAAAAGCTTGAATTTGCAAACCATGTTCAGACTAAACGTTGGTGGACAATATATATCTCCCACACAAGATTCTGGCCTTACAAGGATGTGGTATGATGACACACCTTACTTGTATGGTGCAGCCACTGGTGTCACCAACCAAGCTGAAAAGGATGTCCAAATCAACTACCAGACCATGCCACGGTTGCATTTCTGTGATTACTATTATTCCAAAGTCAATGAGATTGTTTTCAATATCTATGTCAACAACCAAACTGCAGAAGCTCAAGCTGATGTGATTGGATGGACAGGAGATGTGGAGGGGGATGAGCAGCTTTGGCTTGCTCTACACCCAGCACCTGATACAATGCCAGAGTTCTATGATGCCATACTCAATGGGGTGGAGATATTCAAGATCAATGACACAAACTTGTCTGGTCCCAATCCTCAGCCTTCAGAGATGTTCCTCAGGCATCAAGGGGATGGAATGGGTTTCCAAAACCCCAAAGCATATGATAAGAATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTTTTGCCTTAATGGCTGCAATATGTGTTGCTGTCTACCACAAGAAGAAGAGAGCTCCGGGGTCTGACACACACACAAGCTGGCTTCCCATCTACTTGAACTCACACACAAATGGCAGCAAATCCACCTCATCTGGGAAGAGCATTGCTAGTGGCAACCTCTCTGTCATGGCTCAAGGTCTTTGCCGCTATTTCTCCTTACAAGAGATAAAGCATGCAACCAAGAATTTTGATGAATCCAACGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTCATTGATAATGGAATGAAGGTGGCAATTAAGAGGTCTAATCCACAATCAGAACAAGGAGTTAATGAATTCCAGACTGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGATTTTGTGAGGAAGATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGAACCTTTAGGGAACATTTGTATAAAGGCAACAAGCCTTTGTCTACTCTATCATGGAAGCAAAGGCCTGTTTTGAATCCTAATCTTCCAAAGGAACAGGTTAGTCTTGCGGATTGGGCATTGATCTGCAAACAAAAAGGAACGCTAGAGGATATTATAGACCCCCATATCAAGGGAAAGATTAATCCAGAAAGCTTGAAAAAGTTTGTAGACACAGCTGAGAAGTGTTTGTCTGACAGTGGACTTGACCGTCCCTCCATGAATGATTTGTTGTGGAATTTAGAATTTGCTCTCAACCTGCAAGAGAACGTTGATGGTTCAACTCACTCTTCTCGTGTTGAGGAAAGTGAGTTTGAAGAAATAAGCTTGAGAGACAAGGACATGGCTGCCCATTATAAGAACCTGAGCCTTGGAAGTGAGCATGAGCTTAGCCAGGATTCAAGTGAGAATCCCACTGCCATCTTCTCACAACTTGTCAATCCTACAGGGCGATGA 2124 0.4416 MHTRACLLLSLVGILVLLNGIHGAWTEEPGSLILGCGLGEGGAKDVEGRQWIPDDKFLEAQGNSITSKASYQDPSVLSEVPYMSARVFTSEATYKFPVLPDKRYWLRLHFYPSLYGSLNPSDSYFSVTANGVTLLSNFSASITCEALSQAYIDREYSLAPLNTDSLTLTFKPSDKYKGAFAFVNGIQLIPMPELFDSGALVGYADQTVDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQAEKDVQINYQTMPRLHFCDYYYSKVNEIVFNIYVNNQTAEAQADVIGWTGDVEGDEQLWLALHPAPDTMPEFYDAILNGVEIFKINDTNLSGPNPQPSEMFLRHQGDGMGFQNPKAYDKNAVIGGAAGGAAGFALMAAICVAVYHKKKRAPGSDTHTSWLPIYLNSHTNGSKSTSSGKSIASGNLSVMAQGLCRYFSLQEIKHATKNFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDDEMCLVYDYMALGTFREHLYKGNKPLSTLSWKQRPVLNPNLPKEQVSLADWALICKQKGTLEDIIDPHIKGKINPESLKKFVDTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENVDGSTHSSRVEESEFEEISLRDKDMAAHYKNLSLGSEHELSQDSSENPTAIFSQLVNPTGR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00019 707 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Sebi606g00019 707 SUPERFAMILY Protein kinase-like (PK-like) 441 565 IPR011009 -
Sebi606g00019 707 Gene3D Transferase(Phosphotransferase) domain 1 546 643 - -
Sebi606g00019 707 ProSiteProfiles Protein kinase domain profile. 465 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi606g00019 707 Pfam Malectin-like domain 35 246 IPR024788 -
Sebi606g00019 707 FunFam FERONIA receptor-like kinase 31 192 - -
Sebi606g00019 707 FunFam receptor-like protein kinase FERONIA 427 540 - -
Sebi606g00019 707 Gene3D - 261 341 - -
Sebi606g00019 707 Gene3D - 34 191 - -
Sebi606g00019 707 SMART serkin_6 465 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi606g00019 707 PANTHER OS03G0124300 PROTEIN-RELATED 265 411 IPR046957 GO:0004672
Sebi606g00019 707 MobiDBLite consensus disorder prediction 682 707 - -
Sebi606g00019 707 Gene3D Phosphorylase Kinase; domain 1 425 540 - -
Sebi606g00019 707 Pfam Protein tyrosine and serine/threonine kinase 469 558 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00019 Sebi-Chr606 191396 193987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00019 565 707 Receptor kinase-like Gene Family AT3G51550 44.720 6.13e-34 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi606g00019 Malectin_like 4.1e-15 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00019 - - gmx:102659961 889.412