Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi606g00009 | ATGGCGCGAAAGCAAAGGGAAGAAGAAGAAGGGACTCCAGTGAACATTACTGTGGGTTCTAATGTCTGGGTTGAAGATCACGATATAGCTTGGGTTGATGGCCAGGTATCAAAAATCAACGGACAGGATGTTGAAGTTGAAGCTACCAATGGAAAGAAGGTTGTGGCAAAGTTATCAAAAATATATCCCAAAGATACGGAAGCTCCTGCTGGTGGAGTGGATGATATGACAAAGTTGTCCTATTTGCATGAGCCTGGAGTCTTGCAGAACTTAAAAATTAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTCTGATTGCAATAAATCCATTCCAAAAACTACCTCATATTTATGATGCACACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATGAAACAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGCAATACCTTGCTTTCTTAGGTGGTAGGGTTGCCACTGAAGGACGAACAGTTGAACAACAAGTTCTTGAATCAAACCCAGTTTTGGAAGCATTTGGTAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAATTAATGATCCTGAACGCAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGGCATCCTAAAACATTTCATTACCTTAACCAGTCAAAATGCTTTGAACTGGCTGATATAAGTGATTCTCGTGAGTATCTTGCCACTAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTTCGATTCTTCATCTTGGTAATATTGAGTTTGCTAAAGGAAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAATCCAAATTCCACTTAAAAACAACTGCTGAGCTCCTTATGTGTGACGTTGGTGGCTTGGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAACAGTCAGCAGAGATGGCTTAGCAAAAACAATTTATTCTAGGCTGTTTGACTGGTTGGTGGACAAGATTAATAATTCAATCGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGGCAAACACGTGTTTAAAATGGAACAAGAAGAATATACGAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGGTCTCCTCTCTCTCTCTCTTATTTCACTTTCCTTAAGGGCTTGAGGAGTCATTTTGTGTTTAAAAGCAGTCAACTTAGACGTTCTGAAACTGAATGGAAAGCTGAAGCTAGTATGCTTTTTTATATGCTTTTTGTTATTGATGATTTTGATGATGGTAAACCTGGAGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCTAAGTCAACACATGAAACATTTTCAAACAAACTTTATCAAACATTTAAGAATCACAAGCGCTTTATAAAGCCAAAATTGTCTCGAACAGATTTCACCATTTCTCATTATGCTGGCGAGGTGCTGTACCAGTCTGACCAATTTTTAGATAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGAGTGCTTCGAAATGCCCTTTTGTAGTAGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCAAAATTTTCTTCAATTGGGTCTCGTTTTAAGGAAGCTAACAAACCATGTTTTAATATCCTGAATGGTGCAGCTGCAACTACAACAGCTAATGGAAACACTAAACTCAACGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAGTTTTTGAGAATGTCAATATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGCCGTGCTTTCTTTGAGTTTATAAACCGTTTTTCCCTCCTTGCCCCAGAGGTCACAGAAGCAAACCATGATGAGAAGACTGTTTGCCAAAAGATTTTAGAAAAGATGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGACGCAAGGAGAGCTCAAGTACTAAGAAGACTTGCATGCAAACTTTATCATCACCTGAGAAGAGAGGCTGCTGCTGTGAAAATTCAGAAGAATGCACCTTTGAGGGCAATTGCTGCCCTTAAGGAGTACAGTTTCAGGAGACGGACTAAAGCTTCCGTCATAATTCAGGCTCGGTGGCGGTGCCACAAAGCTTCCTCGTATTATAAGAGGCTGAGGAAAGGTGCAATAGTGACCCAATGCCGATGGAGGGGGCGTTTGGGCAGGAAAGAACTTAGGAAACTGAAAATGGCTGCAAGAGAAACTGGCGCACTTAAAGAAGCAAAGGACAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAGAGTTTAAGGACCAACCTAGAAGAATCCAAAGCACAAGAGATAGCAAAACTGCAGAATTCACTGCAGGAGATGCAGGGAAAAGTTGATGAAGCCAATGCTGTGCTTGTAAAGGAGCGAGAGAATGCAAAGAAAGCTGTTGAAGAAACACCTCCTGTTATTAAAGAAACTCAGGTTATTGTTGAAGACACACAGAAGATTGAATCACTAACAGCGGAAGTTGAGAACCTAAAGGTGTATAATTTATCTCATCTATATGATGTTGCCTTGGCTTTACATTCCCCACAGACTTCACTAGAGTCTGAGAAAGAAAAGCTGATGATTTTGAAAGGAAATATAATGAAGTCCAAGCTTCAAGTGAAGAAAGGGAATCAGAGAATCAGGTTCTACGTCAACAAGCTGTGTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCCAGATCAATTATTCAGAGAGCTGACAGTGGACATATTGCAGTGGAAGCAAAACACATTGGATATGCATAGCCCATCAATGAACCACAGGGAATCGTCTGAAGTGGAGGATAAACCACAGAGGTCATTGAATGAGAAACAACAGGAGAACCAAGAGTTGCTCATTAGATTTGAGCGTACTAGCGTTTTTGATCGTATAATCCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACACTTCTCTTGTTGCTCCAGCGAACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCTCAACGCCGTCGTTCTTCCTCAGCAACCCTGGGAGTCAATCTTTCCCTAATAAATGGTAGCATGAGTGGTGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCACTGCTTTTCAAACAGCAGCTTACAGCTTATGTTGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATATCTCCCTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAAGGATCATCACGTTCAGTTGCAACCACTGAAGCCCAGAAAGCTCTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTCTTTCATCAATGTCCAACTATTCAATAGCTGGTTTGGCTGAACTGGAGCATTGGTGTTACAAGGCAACAGATGAGTATGCAGGTTCAGCCTGGGATGAGCTCAAACATATTAGACAGGCTATTGGATTTCTGGTCATACATCAGAAACCAAAGAAAACGCTAGATGAAATAAGTCATGACCTATGCCCAGTCCTCAGTATACAACAGCTATATCGAATTAGTACCATGTACTGGGATGACAAGTACGGCACACATAGCGTATCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACAGAAGATTCAAACAATGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCGAGCATTCCGTTTTCTGTTGATGACATATCAAAGTCAAAGGAACAGATAGATATCTCTGATATAGAGCCACCGCCACTAATTCGTGAGAACTCTGGCTTTAGTTTCTTGTTGCCACGCCCAGACTGA | 4434 | 0.4055 | MARKQREEEEGTPVNITVGSNVWVEDHDIAWVDGQVSKINGQDVEVEATNGKKVVAKLSKIYPKDTEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQKLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINETKSNSILVSGESGAGKTETTKMLMQYLAFLGGRVATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCFELADISDSREYLATRRAMDIVGISQKEQEAIFRVVASILHLGNIEFAKGKEVDSSVPKDDKSKFHLKTTAELLMCDVGGLEDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINNSIGQDSNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQANTCLKWNKKNIRRSRSIGATLNLLTTKMFWTLLKRSPLSLSYFTFLKGLRSHFVFKSSQLRRSETEWKAEASMLFYMLFVIDDFDDGKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVVGLFPPLPEETSKSSKFSSIGSRFKEANKPCFNILNGAAATTTANGNTKLNEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEVTEANHDEKTVCQKILEKMGLKGYQIGKTKVFLRAGQMAELDARRAQVLRRLACKLYHHLRREAAAVKIQKNAPLRAIAALKEYSFRRRTKASVIIQARWRCHKASSYYKRLRKGAIVTQCRWRGRLGRKELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEIAKLQNSLQEMQGKVDEANAVLVKERENAKKAVEETPPVIKETQVIVEDTQKIESLTAEVENLKVYNLSHLYDVALALHSPQTSLESEKEKLMILKGNIMKSKLQVKKGNQRIRFYVNKLCPWHLISSSQDAPDQLFRELTVDILQWKQNTLDMHSPSMNHRESSEVEDKPQRSLNEKQQENQELLIRFERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLGVNLSLINGSMSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFLSSMSNYSIAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSKEQIDISDIEPPPLIRENSGFSFLLPRPD | 1477 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi606g00009 | 1477 | SMART | MYSc_2a | 65 | 809 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 43 | 903 | IPR027417 | - | |
| Sebi606g00009 | 1477 | Coils | Coil | 936 | 977 | - | - | |
| Sebi606g00009 | 1477 | ProSiteProfiles | IQ motif profile. | 874 | 903 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | Coils | Coil | 897 | 931 | - | - | |
| Sebi606g00009 | 1477 | PANTHER | MYOSIN | 63 | 1408 | - | - | |
| Sebi606g00009 | 1477 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 321 | 453 | - | - | |
| Sebi606g00009 | 1477 | Pfam | IQ calmodulin-binding motif | 852 | 872 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | Pfam | IQ calmodulin-binding motif | 875 | 895 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | ProSiteProfiles | IQ motif profile. | 851 | 877 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | Gene3D | Kinesin motor domain | 21 | 305 | IPR036961 | - | |
| Sebi606g00009 | 1477 | PRINTS | Myosin heavy chain signature | 101 | 120 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | PRINTS | Myosin heavy chain signature | 205 | 232 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | PRINTS | Myosin heavy chain signature | 158 | 183 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | PRINTS | Myosin heavy chain signature | 438 | 466 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 17 | 66 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | FunFam | Myosin 2 | 321 | 438 | - | - | |
| Sebi606g00009 | 1477 | Gene3D | - | 743 | 850 | - | - | |
| Sebi606g00009 | 1477 | MobiDBLite | consensus disorder prediction | 1101 | 1119 | - | - | |
| Sebi606g00009 | 1477 | Gene3D | - | 454 | 685 | - | - | |
| Sebi606g00009 | 1477 | FunFam | Myosin heavy chain | 261 | 316 | - | - | |
| Sebi606g00009 | 1477 | FunFam | unconventional myosin-Va | 853 | 901 | - | - | |
| Sebi606g00009 | 1477 | Pfam | Myosin head (motor domain) | 73 | 474 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | Pfam | Myosin head (motor domain) | 554 | 796 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | ProSiteProfiles | Myosin motor domain profile. | 71 | 808 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Sebi606g00009 | 1477 | SMART | iq_5 | 850 | 872 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | SMART | iq_5 | 873 | 895 | IPR000048 | GO:0005515 | |
| Sebi606g00009 | 1477 | ProSiteProfiles | Dilute domain profile. | 1138 | 1420 | IPR002710 | - | |
| Sebi606g00009 | 1477 | Pfam | DIL domain | 1330 | 1399 | IPR002710 | - | |
| Sebi606g00009 | 1477 | SMART | DIL_2 | 1289 | 1402 | IPR002710 | - | |
| Sebi606g00009 | 1477 | MobiDBLite | consensus disorder prediction | 1096 | 1121 | - | - | |
| Sebi606g00009 | 1477 | CDD | MYSc_Myo11 | 85 | 796 | IPR036018 | - | |
| Sebi606g00009 | 1477 | Gene3D | - | 851 | 902 | - | - | |
| Sebi606g00009 | 1477 | Gene3D | Kinesin motor domain | 686 | 742 | IPR036961 | - | |
| Sebi606g00009 | 1477 | Pfam | Myosin N-terminal SH3-like domain | 18 | 60 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi606g00009 | Sebi-Chr606 | 80644 | 92999 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi606g00009 | 11 | 1477 | Myosins gene family | AT1G54560 | 68.532 | 0.0 | 2131 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi606g00009 | K10357 | - | qsa:O6P43_011234 | 2098.17 |