Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi606g00002 ATGTCTTCATCTTTACCTGTTCTTCCCACTCCCCTGGAAAACAAGTATATGAAACCCCCGGATTCTTTTCAGCTTTCACCCATCAGAGATCTTACTGCAAATCCTGCCTCACTGCAAGCTACATCATCAAATTCAATCAGAAGTGTTGGGCAGGTGTTTTCATCCCCAGCTGAATGTCCTGGTGACATCCCTTTTTCCTCTGTTTTACAGCATGATAGGCAATATCAAGAATCTCCCTTCATTTCTCAGACATTAGGTGACGTGTCTTCCGAAATACATTCAACAACATTCGTTTCTCACCCTCAAGAAAATGATGATATTTCCTGGGGACCAGATCCATTTCAGGATATTCTTAGTTTTCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGGAAAACAGTGCTTGTTTCATGAATGATGACAATGTAAAAAAATCGGATTTTGGGGAGTGGGTTGATCAGTTAATGTCTATTGATGATTCTCTTCACCCAAATTGGAATCAGCTTCTTGGTGAGGACAATGTATCAGAATCAAAACCAAAGGCAACACAGGTTTCCCAGCAGCAACAAATACCATCTGGAGAAGGTAATGGTCTTTGTAATTCATCATCTACTGCACCGCAAACTAAGCCTAGAATGCGTTGGACACCAGAACTTCATGAGGCCTTTGTGGAAGCAGTCAATCAGCTTGGTGGTAGTGAAAAGGCTACTCCAAAGGGTGTCTTGAATCTGATGAAAGTTGAAGGCCTTACCATCTATCATGTAAAAAGTCACCTACAGAAATATAGAACTGCCAGATACAAACCTGAGTCATCAGAAGATGCAGGAACTTCTGAGAAAAAGATGAGTTCCATTGAAGAAATGAAATCTCTGGACTTGAAAACGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTCCAGAAACGGCTTCACGAACAACTTGAGATTCAAAGGAAGTTGCAGATTCAAATTGAAGACCAAGGGAAACGTCTTCAGGTGATGTTTGAGAAACAGAGAGAGATGGGAGACAGCAAGGTCAAGGGCTCATCCTCCTCTATGGACGCGCCTTCTACCGCACCATCAGACACAGTGCTACCTTCTTCACCAGTAGACAAATTAGAAACCTCAAATGAGGAACATGACAAATTGGGAAGCAACAGCAGCATTCCAAAAGCCATGCCTGAAGGAAGTTCCCAGGATGCAAGCACAAAGCAAATGGTAGCTGAAGCTGAAGTTATCAATGAACAAGAGACCATAGATGATCAGTTTGCTGCACCACCCACAAAACGGATGAAGAGTTGA 1311 0.4256 MSSSLPVLPTPLENKYMKPPDSFQLSPIRDLTANPASLQATSSNSIRSVGQVFSSPAECPGDIPFSSVLQHDRQYQESPFISQTLGDVSSEIHSTTFVSHPQENDDISWGPDPFQDILSFPENVSVQHDQVENSACFMNDDNVKKSDFGEWVDQLMSIDDSLHPNWNQLLGEDNVSESKPKATQVSQQQQIPSGEGNGLCNSSSTAPQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEDAGTSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQVMFEKQREMGDSKVKGSSSSMDAPSTAPSDTVLPSSPVDKLETSNEEHDKLGSNSSIPKAMPEGSSQDASTKQMVAEAEVINEQETIDDQFAAPPTKRMKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi606g00002 436 MobiDBLite consensus disorder prediction 393 408 - -
Sebi606g00002 436 NCBIfam myb-like DNA-binding domain, SHAQKYF class 210 264 IPR006447 GO:0003677
Sebi606g00002 436 MobiDBLite consensus disorder prediction 348 375 - -
Sebi606g00002 436 MobiDBLite consensus disorder prediction 264 289 - -
Sebi606g00002 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Sebi606g00002 436 FunFam Myb family transcription factor 209 267 - -
Sebi606g00002 436 MobiDBLite consensus disorder prediction 1 24 - -
Sebi606g00002 436 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 180 408 IPR044848 GO:0003700
Sebi606g00002 436 SUPERFAMILY Homeodomain-like 208 264 IPR009057 -
Sebi606g00002 436 Coils Coil 300 320 - -
Sebi606g00002 436 Gene3D - 209 268 - -
Sebi606g00002 436 MobiDBLite consensus disorder prediction 171 211 - -
Sebi606g00002 436 MobiDBLite consensus disorder prediction 341 436 - -
Sebi606g00002 436 Pfam MYB-CC type transfactor, LHEQLE motif 299 343 IPR025756 -
Sebi606g00002 436 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Sebi606g00002 436 MobiDBLite consensus disorder prediction 171 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi606g00002 Sebi-Chr606 7525 10596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi606g00002 91 364 G2-like Transcription Factor Family AT3G04450 50.000 7.71e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi606g00002 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi606g00002 - - mtr:25499705 626.32