Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi604g00005 ATGAAAATGGAGGCCACGACCCAAAACCACAAGTCCCTCTTCGTGAAGAAGCTTGTTTTCTTCTGTTTCTGCATCATTCAAAGTTCACTCTCACTCTCAGATACTTCACCATCTGTTTCAAAATCAACCTATGTATTCCCCAAAGAAGCTCTCCCCAGTAAATCTGGTTACCTCCCAGTGAGCCCCACTTCCTCTTCCTCCATTTTCTACACTTTCTATGAAGCACAAAACTCAACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTACGAACTTGGACCCTGGCGTGTCACCAATTCCCTTACCCTTCAACCCAACCCTGGTGCTTGGAATCGAATCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGATTCAGCATAGCCTCAACACCAGAAGAAATCCCAACCGATCAAAACACCGTTGCCAAACACCTTTTTGCTGCCATAACCAGGTTTGTTCAGCTTGATCCTGTTTTCAAGTATCGACCTATTTATATTACTGGGGAAAGCTATGCTGGCAAGTATGTTCCTGCAATTGGGTATTACATATTGGAGAAAAATGCTCAGTTAAAGGTCTCTGAGAGAGTGAATTTGGCTGGTGTGGCAATTGGGGATGGGTTAACAGACCCTGTAACCCAAGTGGTTACTCACGCTTCCAACGCTTACTATGTTGGATTGATCAATGAGAGGCAAAAGAATGAGTTGGAGAAAGCTCAATTGGAAGCTGTTAGATTGACCCAGATAGGGAATTGGAGTGAAGCAACGGATGCGAGAAATAAAGTCTTGAGAATGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAAATTCCTTATGAAGATGATTTGGTTGCTCAGTTCTTGAACCTTCCTGAGGTAAGGAAGGCCTTGGGGGTGACAGTGAATGAATCATTTGTGTATGAGGTATGCAGTGATACTGTTGGCTCTATACTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTAGAGCACTTGGTGAGGAGGAGCAGGGTGTTGTTATATCAAGGTCAGTATGATTTGAGGGATGGTGTGGTCCAAGTAGAGGCTTGGGTGAAGACAATGAAATGGGAAGGAATTGTGGAGTTTCTGAATGCTGAGAGGAAGATTTGGAAGGTAAATGGAGAGCATGCTGGGTATGTACAAAATTGGAAGTCTCTTACTAATGTTGTGGTTTTGGGGGCTGGGCATCTTTTGCCTACTGACCAGGCTGTGAATTCTCAAGCAATGATAGAAGATTGGGTACTGGAAAAGGGTTTTTTTAAAAGTGAGCAGCAGAAGAAAAATGCATCAAGAAATTCTGCATTTGCTGTGGAATTATTTGAGATTAACCTTAAATTTTAA 1428 0.4314 MKMEATTQNHKSLFVKKLVFFCFCIIQSSLSLSDTSPSVSKSTYVFPKEALPSKSGYLPVSPTSSSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTNSLTLQPNPGAWNRIFGLLFLDSPIGTGFSIASTPEEIPTDQNTVAKHLFAAITRFVQLDPVFKYRPIYITGESYAGKYVPAIGYYILEKNAQLKVSERVNLAGVAIGDGLTDPVTQVVTHASNAYYVGLINERQKNELEKAQLEAVRLTQIGNWSEATDARNKVLRMLQNMTGLATLYDYTRKIPYEDDLVAQFLNLPEVRKALGVTVNESFVYEVCSDTVGSILHADVMKSVKYMVEHLVRRSRVLLYQGQYDLRDGVVQVEAWVKTMKWEGIVEFLNAERKIWKVNGEHAGYVQNWKSLTNVVVLGAGHLLPTDQAVNSQAMIEDWVLEKGFFKSEQQKKNASRNSAFAVELFEINLKF 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi604g00005 475 SUPERFAMILY alpha/beta-Hydrolases 50 444 IPR029058 -
Sebi604g00005 475 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Sebi604g00005 475 Pfam Serine carboxypeptidase 51 443 IPR001563 GO:0004185|GO:0006508
Sebi604g00005 475 Gene3D alpha/beta hydrolase 33 459 IPR029058 -
Sebi604g00005 475 FunFam Carboxypeptidase 37 450 - -
Sebi604g00005 475 Coils Coil 245 265 - -
Sebi604g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Sebi604g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Sebi604g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Sebi604g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 415 428 IPR001563 GO:0004185|GO:0006508
Sebi604g00005 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 54 431 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi604g00005 Sebi-Chr604 223754 225181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi604g00005 304 443 Calmodulin-binding Proteins AT2G22960 21.986 2.22e-06 46.2