Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi602g00026 ATGCAAAGCTTCAAGACAGCACAATCAAGCTCTCAACTTTATTGCCACCCCTCCTTCTTGCTTCGGGGAGATGACACCAACCGAAACCCAACGCGTTTCTCTGATCTTGGAGAGCTTCACCATTCCTCTTCTGTCTTTCAACACCAAGATACTGTTGATTTAAGCTCAAGCTCTATGTTTAGTGTAAAGTCAAGCAACGTTGTTGTTGGTGGTAGTAACATGCAATATGGGACATTGAACACGAATGTTGGGTCTGCAGAGATTGCTTCAACAGGGGCAGGGTGCTTGGATACAGGGCAGCAGCTAATGTACCACAAGGGAATCACCATGGCTACCTTGCCTTTGGGGAATGGTCATGTTGAGAATTGGGCTGATTCAGGCATGGCAGATAATAGCCAACAGACAGATGATACTTCCACAGATATTGATACTGATGATAAAAACCAAAGCAATAGAATTAAGAATGGGGCACAAATGGTTGTGCACTCCAAGGACCAGACAAAGCTCAGAGCTGAAGATCAGAAGACCCTTCGTAGACTGGCTCAGAACAGGGAGGCTGCAAGGAAGAGTCGGTTAAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGCCGAGCTAGGCTTTCGCAGTTAGAACAAGAGCTTCAACGGGCACGTCAGCAGGGTATATTTATTGCAACTCCAGGGGATCAAGGTCATTTGGCTGTTGGAAATGGTGCCTTGGCCTTTGACATGGACTACGCCCATTGGGTTGATGAGCATCAACGTCTGCTGAATGACCTAAGATCAGCTCTAAATTCTCAAATGGGTGATAATGAACTAAATGTTCTTGTAGATGGTGTCATGGCACATTATGATGAACTATTTAGGTTAAAGAGCATAGGGGCAAAGGCTGATGTATTTCATATGCTATATGGGCCTTGGAAGACACCAGTAGAAAGATGTTTCATGTGGCTTGGTGGATTCCGGTCATCTGAACTTCTCAAGATAGTTCAAAATCACCTTGAGCCATTAACAGAACAGCAGTTGATGGGCATTTTGAATCTGCAGCGATCTTCCCAGCAGGCTGAGGATGCTTTGACTCAAGGCATGGAAGCATTGCAACAATCTCTTATAGAGACACTTTCCTCCACCTCCCTAGGACCCACTGGTACTGGTAATGTTGCTGATTACATGGGCCAAATGGCAATTGCAATGAGCAAGCTTGCCACACTGGAGAATTTCCTTCGTCAAGCTGATCTGTTGAAGCAGCAAACACTGCAACAGTTGCAAAGAATTTTGACCACACGTCAGACTGCTCGAGCTCTCCTTGTCAGAAATGATTACATTTCAAGACTAAGAGCACTTAGTTCATTATGGTTAGCTCGCCCTAGAGAGTAG 1380 0.4514 MQSFKTAQSSSQLYCHPSFLLRGDDTNRNPTRFSDLGELHHSSSVFQHQDTVDLSSSSMFSVKSSNVVVGGSNMQYGTLNTNVGSAEIASTGAGCLDTGQQLMYHKGITMATLPLGNGHVENWADSGMADNSQQTDDTSTDIDTDDKNQSNRIKNGAQMVVHSKDQTKLRAEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRARLSQLEQELQRARQQGIFIATPGDQGHLAVGNGALAFDMDYAHWVDEHQRLLNDLRSALNSQMGDNELNVLVDGVMAHYDELFRLKSIGAKADVFHMLYGPWKTPVERCFMWLGGFRSSELLKIVQNHLEPLTEQQLMGILNLQRSSQQAEDALTQGMEALQQSLIETLSSTSLGPTGTGNVADYMGQMAIAMSKLATLENFLRQADLLKQQTLQQLQRILTTRQTARALLVRNDYISRLRALSSLWLARPRE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi602g00026 459 SMART brlzneu 171 240 IPR004827 GO:0003700|GO:0006355
Sebi602g00026 459 MobiDBLite consensus disorder prediction 123 150 - -
Sebi602g00026 459 Pfam bZIP transcription factor 174 216 IPR004827 GO:0003700|GO:0006355
Sebi602g00026 459 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 178 193 IPR004827 GO:0003700|GO:0006355
Sebi602g00026 459 CDD bZIP_HBP1b-like 175 227 - -
Sebi602g00026 459 SUPERFAMILY Leucine zipper domain 175 218 IPR046347 GO:0003700|GO:0006355
Sebi602g00026 459 Coils Coil 194 221 - -
Sebi602g00026 459 Gene3D - 174 223 - -
Sebi602g00026 459 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 217 IPR004827 GO:0003700|GO:0006355
Sebi602g00026 459 PANTHER TRANSCRIPTION FACTOR TGA9 119 459 - -
Sebi602g00026 459 ProSiteProfiles DOG1 domain profile. 240 456 IPR025422 GO:0006351|GO:0043565
Sebi602g00026 459 Pfam Seed dormancy control 258 332 IPR025422 GO:0006351|GO:0043565
Sebi602g00026 459 FunFam BZIP family transcription factor 174 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi602g00026 Sebi-Chr602 486262 489974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi602g00026 3 459 bZIP Transcription Factor Family AT1G68640 57.872 2.99e-171 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi602g00026 DOG1 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi602g00026 K14431 - gmx:100797393 677.937