Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi602g00012 ATGCACCCTCAGAAGATGGGGTTCCGTGACTACATCGAAGCATTGGAAGAAGAAAGGAAAAAAATCCAGGTTTTCCCCAGAGAGCTTCCGCTTTCATTAGAGCTTGTCACGCAAGCCATTGAAGCGTGTAAGCAGCAGTTGTCAGGAACAATGATGGACTATAATTTGAATGGCCAATCGGAGTGTTCAGACCAGACATCAATGGAAGAAGGTCCTGTTTTTGAAGAGTTTATTCCTATTAAGAAAAGAGCATCCCCTGATTGTGATGAAGAAGAAGATGATGATGATGATGATGAAGAACATTGTCATAAGCACAAGAACAAGAACACCCCTGATAAAAAGAAATCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCTGATCCCCCTCTTCCTAAAGAGGATTTGCCTAGAAAAACAAATGTTGTGGAAGTGACAAGAAATGGTGGTGCCTTCCAGCCATTCCACAGAGAAGAAAGTGCTGTTGTTGGAAAGACTAATACATCTGCATCTGGTAAATCACCCTCTTCACCACCAGTACCTGCTACAAGTTCTACAGGACCAGCCAGAGTAGACAATGGTGGAAGCAACAAGAGAGAAGAGAAAGGACAGAATCAGAGAAAGCAGCGCCGGTGCTGGTCACAGGAATTGCACAAGCGCTTCTTGCAAGCCCTTCACCAGCTTGGTGGTGCAGATACTGCCACACCAAAACAGATCAGGGAACTGATGAAAGTTGATGGACTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTTTGCACACAAGAAGGAGCCCTGTGATTCACAACAATGCTAATTCACAAACAGCTCCTTTGTTCCTTGTGGGAAACATTTATGTTCAACCACCAGAGTATGCTGTGGCCACCACAACAGCATCAGGAGAATTGACCACAGTTACTGCTCCAACTGGAATCTATGCACCTGTGGCTGCACATCCTACAGCTGTCCAGCACACATCAGCTCCTGCAGTTATGAAGGCACAATTAAAGCAATTAGAGATGTCTGAGCATTCACATTCAGAAGAAAGGGCTAATCATAGTGAAGGGGCTGTTCATTCAAACTCCCCTGCCTCATCATCCTCCACCCATACCACCACAAATTCACCTAGGTGTTGA 1143 0.4462 MHPQKMGFRDYIEALEEERKKIQVFPRELPLSLELVTQAIEACKQQLSGTMMDYNLNGQSECSDQTSMEEGPVFEEFIPIKKRASPDCDEEEDDDDDDEEHCHKHKNKNTPDKKKSDWLRSVQLWNPDPPLPKEDLPRKTNVVEVTRNGGAFQPFHREESAVVGKTNTSASGKSPSSPPVPATSSTGPARVDNGGSNKREEKGQNQRKQRRCWSQELHKRFLQALHQLGGADTATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRSPVIHNNANSQTAPLFLVGNIYVQPPEYAVATTTASGELTTVTAPTGIYAPVAAHPTAVQHTSAPAVMKAQLKQLEMSEHSHSEERANHSEGAVHSNSPASSSSTHTTTNSPRC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi602g00012 380 Pfam Myb-like DNA-binding domain 210 259 IPR001005 -
Sebi602g00012 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 205 265 IPR017930 -
Sebi602g00012 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 349 IPR044787 GO:0003700|GO:0006355
Sebi602g00012 380 MobiDBLite consensus disorder prediction 342 380 - -
Sebi602g00012 380 SUPERFAMILY Homeodomain-like 206 266 IPR009057 -
Sebi602g00012 380 NCBIfam myb-like DNA-binding domain, SHAQKYF class 208 263 IPR006447 GO:0003677
Sebi602g00012 380 MobiDBLite consensus disorder prediction 342 357 - -
Sebi602g00012 380 Gene3D - 207 265 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 150 212 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 99 115 - -
Sebi602g00012 380 FunFam Myb family transcription factor 207 265 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 358 380 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 162 192 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 78 115 - -
Sebi602g00012 380 MobiDBLite consensus disorder prediction 194 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi602g00012 Sebi-Chr602 295932 297739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi602g00012 10 320 G2-like Transcription Factor Family AT1G68670 49.850 2.05e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi602g00012 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi602g00012 - - gmx:100819750 484.182