Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi602g00008 ATGCATCGTCGCACACACAATTCACCACGCCGAATCCTTCTGTGTCGCGTTTCATTACCCATCCCAACACATCACTATCCACCCTATGAGCACCAAATCCCCATCACAAAACCTACGAAAATCTTCAAGCTTCAGCCCCTCAAAGTTGGGAACAGAATAATCAGAAAGAGGATTCATGTCCGTGTGGGGCATGTGATGCCGTCAAGGTGCACTGAGGAGTTCCGTCTGAGGAAGGTCAAGAACGATCAACTCAAGGCTGAAGCTAAGGTTAAGGGTGAGGTAATCAGCACCAAGAGACAACCTCAAGGTCCTAAACCAGGTTTCATGGTTGAAGGAGCTACATTGGATACTGTTACTCCAATTCCTTATGATGTCGTAAATGACCTTAAGGGAGGATACTAG 402 0.4677 MHRRTHNSPRRILLCRVSLPIPTHHYPPYEHQIPITKPTKIFKLQPLKVGNRIIRKRIHVRVGHVMPSRCTEEFRLRKVKNDQLKAEAKVKGEVISTKRQPQGPKPGFMVEGATLDTVTPIPYDVVNDLKGGY 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi602g00008 133 Gene3D - 68 125 - -
Sebi602g00008 133 PANTHER 60S RIBOSOMAL PROTEIN L21 48 132 IPR001147 GO:0003735|GO:0005840|GO:0006412
Sebi602g00008 133 FunFam 60S ribosomal protein L21 68 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi602g00008 Sebi-Chr602 237381 237963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi602g00008 48 133 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 81.395 7.99e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi602g00008 K02889 - gmx:100500046 168.318