Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi601g00028 ATGGATTTGTCACATAATGAGTTTATCACTACAATGCCTGATGTGTCAGCAGTTCAAAATTTGCGAGAGTTGAGACTTGATAAATGTAAGAATCTAATTGAAGTTCATGAATCTGTTGGATTTCTCAAAAAACTTGCTCATTTAAGTGCTTCAGGATGCATTAAACTTAAGAGTTTCCTGCATAGAATGTTTTTACCATCTCTGGAAGTCCTTGACCTTAATTTATGTGCAAGACTTGAACACTTCCCTGATATAGTGAACAACATGAATAAGCCATTGAAGATTTATCTGATAAATACTGCTATTAAAGAGCTACCAGATTCCATTGGTAATCTTATTGGGCTTGTTTGTATAGAGATACCAAGTAGCACAAAACTCAAATATCTACCAAGTAGTTTATTCACATTACCAAATGTTGTTGCCTTTAAAATGGGTGGATGTTCCCAACTTCGAGAATCCTTCAGAAGGTTTGCACAAAGCCCTTCAGCAGCCAATGGTTGTCGTGCGAAAACATTGAACTTTGGAAATGGTGGTTTGTCAGATGAAGATCTCCAAACAATTCTCAATTGCTTTCCAAAATTAGAAGAGTTGATTGCATCAGAGAACAATTTTGTATCTCTCCCTGCATGCATTAAAGAGTCCATTCACTTGACAAGTCTTGATGTTAGTGTTTGCAAGAAGCTTCAAGAAATTCCTGAATGCACCAACTTGAGAATTCTTAATGTCCATCGTTGTGTAAAGCTTAAATACATTTCAGAGTTGCCATCTACTATTCAAAAAGTTGATGCAAGATACTGCTTCTCCCTAACTAAAGAGACGTTGGACATGTTATGGTATCAGGTGTCAAAGGAGATACGTGGATTAGAAATTGTGATGCCCCAAACCGAGATTGCAGAAAGGTTTGACTTTATTGACAATGGAGGTAATCCACGCTTCTGGGCTCGTGGGAAGTTCCCTGTTTTTGCTTTAGCATTGGTGTTTCGTGATGTTAATGAAAAGGCAAGTAATTCTCGGCGGCAACTTGTTGAGCTTCAGTTAATCATCAACGGTCAATGTGTGCCACACAAAGGCTATTACAGCTTCAGAATTGCAGCAGATCATGTGTTAGTTTGTGATCTAAGACTTCTGTTTAGTGAAGAAGAGTGGAAGGGCCTTGATGCATTTCTTGTTCATGATTGGAATCTAGTGTTGGTTTCATATGAAGCACCATCCACCATGACACTAAGCTGTTGGGGAGTTTTTATGTACAAACAAGAAACCAACATGGAAGATGTCCAGTTCATGTGTCCCGACCCAATTAAGTACTCAGATATGGCACTCATATCACCGCCAACAATTCTCAGAAGAGATCCTAAGCAGGAACTAAGGAAGATGATAGACCATATGTGTCTGGATGAAATGTTTGATGGGATGTTGATGGAAACCATGGACTATGAAAAACGAGATGACTTTGCAGATAAAGATTTTGCTGTGGAGCAAATGCATGTTCTAATGGGAGGTTTGAAGGAGATATCAACACAGGCTAAGGATGTATTGGAAGGCAAAGCAGTAGCTAATAGAAACTCCACCCTGGCAATGTTTCTAGAGGCTATGAAGAAACTTGATGAGGAAGATAAGAAAGATGGGCAAGAAACCATTTTCTTTAAGGATCTCGCATTGATACGACTAAAGGATGGAGTGAAGTCACCTATGAAAATAGCAGAAACCTCAACCTCTGGCCATCAGGGAAGTTCAAGCAGTGATCCTCAGCAGCAGGAAATAATTATGGAGATTTTCTCAGAAGGAATGGTTGCAGGACTTCTTGAAGCACAAAATAGCTTTCCTACTCTTGATATAGAGACAATCATGCATGCTGCCTTAGAAAAGGGTAACAGGGTTAGATGGTCATCCCCAGAGTCAGAGGTAGAAAACCCTGTAGACCAAGTAGAAAGGAAGATATACATGGAAGGAGTTATCAATGGACTCCTTGAAGCACAATTGAGCTTTCCCACTCTGGACATACAAGCAACACTAGATGCAGTGCTACTAAAGTATGGAGGGAAGCCACCTAATGAAGTAGGAGGAGAAGCCTCAAGCTCTAGTCATCAGCAAGAAAGCTCAGAGACACAAAGTAATGATCCTGAGCAGCGGAAAATAATGATGGAGATGTTTTGGGATGGAGTGTTGGATGGACTAAACGAAGTTAAGAATAAGTTTCCTTCTCTTCATATAGGGAGAACTGTAACTGATGTCTTTAACAAGGGTAATAGGGTTAGATGTTCCAACCCTGGAACTCCAATGGAAAAGAGGATATATATTGAAGGAATTGTCAATGGCCTCCTTGAAGCACAGCTAAGCTTTCCCACTCTGGACATAAATGCAACACTAGATATTGTGTTAAGTAAGGGGGGCCGTAAAGTTGCAGATAAGAAAGGTAAGCAACCTATGGATTTAAGAGATGGAGAAGCCTCAACCTGTGTTCATCAGAAAAGTTCAGAGGAACAAGGCATTGATCCTCAGCAGCTAGAAATAATGAGGGAGAATTTGTGGCTTGGAATGTTGGATGGACTTCTTGAAGCAAAGAGTAACTTTCCTACTCTTGATATAGAGACAACCATTGTTGCTGCCTTAGAAAAGGGTAATAGGTTTAAATGGTTAATCCCAGACTCAGAGATAGAAATCCCTGAAGGTGAACATGAAGATCCACTGGCCCGTCTAAAAAGGAAGATGTACATGGAAGGAGTTATCAATGGACTCATTGAAGCACAATTGAGCTTTCCCACTCTGAACATACAGGCAACAGCAGATGTTGTGTTAAGTAACCGTAGAGGACAACCTATAGTTCCAAGCTCTGATGATCCTTTGTTGCAAGCATTCAAGATGATGAATCAAGAAAGTTATGAAGCTGAGGCAAGGAGTAAACTCTATTGGAACTTGATAGAGGAACACAGAGCTCTACGTAAGAAATTTGAACAAGTGGAGAATGGAACTGCTGCTTCAGATAAAGATAGTTGTCTTCTTACTTGGAAAAATCAATATGATGAACTGCTAGAGAAGCTCAACACTCGATCTGCTTTGAGTAGCACAGAGATGCACACAAACATTACAAGATATGAGAAGTTGGCTGCTGTTTTGCAAGGAAGAGCTGATGAATTGAAGAGGCTTTATGATGCTAGCATTGAAGGCTTCCAGAACTCAGAAGAGTTTCAAGATTTAATGAGTGTCATATACTTGTATGGACTGAGGGATGGACTACTTGAAGCACAAGTGGTCTTACTAGCTCTGGACATGTACTACATGGACATAACAACTCCAGTGTTTAAGGAGAATGAGGAGTGTGTAGTGACTGATGAGGCTGCCAAAGAAGTATTGGATTGGACTAAAGAGAAAGTTGCAAGCTCTGACGATTCTTTGTTGCAAGTATTCATGATGATGAAGCAAGAAAGTTGTGAATCTGAGACCAAGAGTAAGCTGTACTGGAAGTTGATTGTGGAACACAAAGCTCTGCGCAATAAATTTGAAGAAATTGAAAATGAAACTATTGCTCTAGATAAAGATAGTTGCAATCAATATGAAGAATTGCTAGAGAAGTTCAACACTCAATCTGCTGAGTTTATTTCAGAGAAGCAACACAACCTTGATGGTACTGAGGATGTCCAGGAAAAGGCAACAAAGATTTCTGATTCAAAATCTGCTTTGAGTAACACAGAGATGCAGAAAGACAATAGAAAAGAAGGCTGCAGAGGTGTCACAAAATATGAGAAGTTGGCTGCTGTTTTGAAAGGAAGAGATAAAAAATTGCAGAGGCTTTATGGTGTTGGCATTGAAGGCTTCCAGAACTCAGAAGAGTTTCAAGATCTAATGAGTGTAATATACTTCAATGGACTGAAGGATGGACTCCTTGAAGCACAGGGGATCCTACTTGCTCTGGACATGGACAGAATGACTTCTCCATTGCTTAAGGAGAATGAGGAACATGTTACTCATGAGGCCGCTGATAGTGAAAATCTTGATGGTTCAATCAGTGCAGCAGAAATTCCAAGTCCTACTGATCCAAAAGTTGACAACCCTCCTGATACTTCTGAATCCTCTGGTGAAGAGATTTTTGTCAACTTTGAAGATTTTGGTCACATGTTTTTTTAA 4122 0.3984 MDLSHNEFITTMPDVSAVQNLRELRLDKCKNLIEVHESVGFLKKLAHLSASGCIKLKSFLHRMFLPSLEVLDLNLCARLEHFPDIVNNMNKPLKIYLINTAIKELPDSIGNLIGLVCIEIPSSTKLKYLPSSLFTLPNVVAFKMGGCSQLRESFRRFAQSPSAANGCRAKTLNFGNGGLSDEDLQTILNCFPKLEELIASENNFVSLPACIKESIHLTSLDVSVCKKLQEIPECTNLRILNVHRCVKLKYISELPSTIQKVDARYCFSLTKETLDMLWYQVSKEIRGLEIVMPQTEIAERFDFIDNGGNPRFWARGKFPVFALALVFRDVNEKASNSRRQLVELQLIINGQCVPHKGYYSFRIAADHVLVCDLRLLFSEEEWKGLDAFLVHDWNLVLVSYEAPSTMTLSCWGVFMYKQETNMEDVQFMCPDPIKYSDMALISPPTILRRDPKQELRKMIDHMCLDEMFDGMLMETMDYEKRDDFADKDFAVEQMHVLMGGLKEISTQAKDVLEGKAVANRNSTLAMFLEAMKKLDEEDKKDGQETIFFKDLALIRLKDGVKSPMKIAETSTSGHQGSSSSDPQQQEIIMEIFSEGMVAGLLEAQNSFPTLDIETIMHAALEKGNRVRWSSPESEVENPVDQVERKIYMEGVINGLLEAQLSFPTLDIQATLDAVLLKYGGKPPNEVGGEASSSSHQQESSETQSNDPEQRKIMMEMFWDGVLDGLNEVKNKFPSLHIGRTVTDVFNKGNRVRCSNPGTPMEKRIYIEGIVNGLLEAQLSFPTLDINATLDIVLSKGGRKVADKKGKQPMDLRDGEASTCVHQKSSEEQGIDPQQLEIMRENLWLGMLDGLLEAKSNFPTLDIETTIVAALEKGNRFKWLIPDSEIEIPEGEHEDPLARLKRKMYMEGVINGLIEAQLSFPTLNIQATADVVLSNRRGQPIVPSSDDPLLQAFKMMNQESYEAEARSKLYWNLIEEHRALRKKFEQVENGTAASDKDSCLLTWKNQYDELLEKLNTRSALSSTEMHTNITRYEKLAAVLQGRADELKRLYDASIEGFQNSEEFQDLMSVIYLYGLRDGLLEAQVVLLALDMYYMDITTPVFKENEECVVTDEAAKEVLDWTKEKVASSDDSLLQVFMMMKQESCESETKSKLYWKLIVEHKALRNKFEEIENETIALDKDSCNQYEELLEKFNTQSAEFISEKQHNLDGTEDVQEKATKISDSKSALSNTEMQKDNRKEGCRGVTKYEKLAAVLKGRDKKLQRLYGVGIEGFQNSEEFQDLMSVIYFNGLKDGLLEAQGILLALDMDRMTSPLLKENEEHVTHEAADSENLDGSISAAEIPSPTDPKVDNPPDTSESSGEEIFVNFEDFGHMFF 1373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 682 709 - -
Sebi601g00028 1373 Coils Coil 1028 1048 - -
Sebi601g00028 1373 Coils Coil 1152 1179 - -
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 802 820 - -
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 1319 1357 - -
Sebi601g00028 1373 SUPERFAMILY L domain-like 2 253 - -
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 802 829 - -
Sebi601g00028 1373 Gene3D Ribonuclease Inhibitor 95 282 IPR032675 -
Sebi601g00028 1373 Gene3D Ribonuclease Inhibitor 1 94 IPR032675 -
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 687 709 - -
Sebi601g00028 1373 MobiDBLite consensus disorder prediction 1217 1238 - -
Sebi601g00028 1373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi601g00028 Sebi-Chr601 432192 436813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi601g00028 1 198 WRKY Transcription Factor Family AT4G12020 33.166 3.49e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi601g00028 - - gmx:121173506 918.687