Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi600g00043 ATACGATACAGGCCTGATGCACCACTTGTACTCCGTGGGATCACATGCACATTTGAAGGAGGGCACAAAATTGGTATTGTTGGCCGAACAGGCAGTGGCAAGTCCACTCTTATTGGTGCCTTATTCCGTCTTGTGGAGCCAGCAGGTGGAAAAATCATAGTTGATGGCATTGATATTTGCTCCATTGGTCTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAAGATCCTACTCTCTTTAATGGGACAGTCAGATACAATTTGGACCCATTATCTCAACACTCTGATCAAGAGATATGGGGGAAAATGTGGACTAATTGTAGCTTCCATATGAAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTCCAAGAGAAAGAAGGGGGCTTAGACTCCTCAGTTGTGGAAGATGGGGCAAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGCTCTTCTAAGGAGAAGTCGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTGAGTTTGCAGATTGTACAGTAATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACTAAGGTCCTTGCCATTAGTGATGGAAAACTGGTAGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGAATCGCTGTTTCGGAAGCTTGTCAAAGAATACTGGTCTCATTTTAAGTCTGCAGAATCTCATTGA 756 0.4365 IRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWGKMWTNCSFHMKVLGKCQLQEAVQEKEGGLDSSVVEDGANWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAISDGKLVEYDEPMNLMKREESLFRKLVKEYWSHFKSAESH 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi600g00043 251 CDD ABCC_MRP_domain2 1 223 - -
Sebi600g00043 251 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 239 IPR003439 GO:0005524
Sebi600g00043 251 FunFam ABC transporter C family member 3 1 240 - -
Sebi600g00043 251 Pfam ABC transporter 11 170 IPR003439 GO:0005524
Sebi600g00043 251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 238 IPR027417 -
Sebi600g00043 251 SMART AAA_5 20 223 IPR003593 GO:0016887
Sebi600g00043 251 Gene3D - 1 241 IPR027417 -
Sebi600g00043 251 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi600g00043 Sebi-Chr600 553746 554947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi600g00043 4 251 Calmodulin-binding Proteins AT2G36910 28.346 1.55e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi600g00043 K05666 - lja:Lj5g3v1961200.1 462.225