Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi600g00020 ATGGCTGAGGACTGGGATCTCTTTGCCATCGTGAGAAGCTGTCAATCAGCCACCAATACTGCCACAACAAAAAACCCACCAAACACCACCAATACTACACATCCTTCCTTGGCCAATTCTACTGTTAAGGAAGAAGAAGAAGAATATGAGGCATTTTCTTTTCCCAATATAGTGCAACCCATGACCAATGAGTTTCAAGAGCTAAACCAATTGTTCACATCCTTTAACCCCACCACCAACACCACTACCCCTAGTGGCTGTGATAACGTCTCAGCAGATTTATGGGCATGGCGTAAATATGGACAAAAACCCATTAAAGGTTCACCATATCCAAGGAACTACTATAGGTGTAGCAGCTCAAAAGGTTGTGCAGCACGAAAGCAAGTTGAACGGAGCAACACTGAAGCTGACATGTTCATCGTCACGTACACCGGAGACCACACCCATCCCAGACCCACCCACCGGAACTCGCTCGCCGGAAGTACGAGAACCAAGCAGCATCAACCCTCTTCACAAGTCAACACTTTACCTTCATCCTCTTCCTCTCCTGCAACACACTCTCCGGTGTCAACGTCCGCAGACCCACCGGAAAACGAGGAAGGAGATCCGGATCCAGACCCGGACCCGGAAATTGAATCCGACGATGAAGGAGAAGACGAAGCAGACATTATGTTACCCAACCCGGATGCCATGGCAACGAATGTCTTGCTGGATTTGGATCACTTTGACGGTGGTTGTTCAACCGGTGGATCCTTACCCGATACGGACCCGGTTTGA 777 0.4891 MAEDWDLFAIVRSCQSATNTATTKNPPNTTNTTHPSLANSTVKEEEEEYEAFSFPNIVQPMTNEFQELNQLFTSFNPTTNTTTPSGCDNVSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCAARKQVERSNTEADMFIVTYTGDHTHPRPTHRNSLAGSTRTKQHQPSSQVNTLPSSSSSPATHSPVSTSADPPENEEGDPDPDPDPEIESDDEGEDEADIMLPNPDAMATNVLLDLDHFDGGCSTGGSLPDTDPV 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi600g00020 258 MobiDBLite consensus disorder prediction 143 229 - -
Sebi600g00020 258 SMART WRKY_cls 91 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi600g00020 258 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi600g00020 258 ProSiteProfiles WRKY domain profile. 86 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi600g00020 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 86 215 IPR044810 GO:0003700
Sebi600g00020 258 Gene3D WRKY domain 78 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi600g00020 258 SUPERFAMILY WRKY DNA-binding domain 90 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi600g00020 258 MobiDBLite consensus disorder prediction 197 223 - -
Sebi600g00020 258 MobiDBLite consensus disorder prediction 154 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi600g00020 Sebi-Chr600 271026 272351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi600g00020 1 185 WRKY Transcription Factor Family AT4G01250 41.850 9.35e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi600g00020 WRKY 9.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi600g00020 - - cam:101509183 177.178