Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi600g00015 ATGGTGTCAAAAAACCCGAACCCTTCAGAGGCTCTGTACTTGGATCCCAATGGCATGGCTCTGGCTGGCCTAGTTCCCTTCACTGATTCTATGGAGGACCCAACCAAGAAGACCCGCAAGCCATACACTATCACCAAGTCTAGGGAAAGCTGGACTGAACCCGAGCATGACAAGTTCCTTGAAGCTCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAAACAGTTATCCAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAACGAAAAGCTGCTCATCCATATCCTCAGAAAGCATCCAAAAATGCTCCAGCACTCTCACAAGTATCGGGATCCTTTCAATCTTCATCTGCTTTGCTTGAACCTGGATATATCCTAAAGCATGATTCTTCATCAATGCTTAAAACTCCTATTATTAACACTGCAGTGTCTTCCTGGTCAAACAACACTTTGCAGAAAACAGCCAATTTATTGCAAGGACAAAAGGTGAATAATTGTTGCAGTAGCAGTGAAAGCACTCCTAGACCACAGCTGGTTCGTGAATCTAATGGTCAAAGGAATAATAACCATCCACTGAGAGTTCTTCCGGATTTTACTCAAGTATACCGCTTCATTGGCAGTGTATTTGACCCAAATGTAACTGGACATCTCCAGGAACTAAAAAGGATGGACCCTATAGATGTTGAGACGGTGCTACTGTTGATGAGAAACCTGTCTATCAATTTAAGAAGCCCAGATTTTGAGGATCATGCAGGGATTGGATTTTGCATGATGAGGTCAATTTGGTGA 858 0.4289 MVSKNPNPSEALYLDPNGMALAGLVPFTDSMEDPTKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPALSQVSGSFQSSSALLEPGYILKHDSSSMLKTPIINTAVSSWSNNTLQKTANLLQGQKVNNCCSSSESTPRPQLVRESNGQRNNNHPLRVLPDFTQVYRFIGSVFDPNVTGHLQELKRMDPIDVETVLLLMRNLSINLRSPDFEDHAGIGFCMMRSIW 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi600g00015 285 FunFam protein REVEILLE 6 isoform X1 50 98 - -
Sebi600g00015 285 SMART sant 47 95 IPR001005 -
Sebi600g00015 285 ProSiteProfiles SANT domain profile. 46 97 IPR017884 -
Sebi600g00015 285 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Sebi600g00015 285 Gene3D - 51 98 - -
Sebi600g00015 285 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 95 IPR006447 GO:0003677
Sebi600g00015 285 Pfam Myb-like DNA-binding domain 48 93 IPR001005 -
Sebi600g00015 285 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Sebi600g00015 285 MobiDBLite consensus disorder prediction 189 215 - -
Sebi600g00015 285 PANTHER SWI/SNF COMPLEX-RELATED 23 266 - -
Sebi600g00015 285 MobiDBLite consensus disorder prediction 98 131 - -
Sebi600g00015 285 CDD SANT 50 93 IPR001005 -
Sebi600g00015 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 97 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi600g00015 Sebi-Chr600 235134 240627 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi600g00015 Myb_DNA-binding 3.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi600g00015 - - gmx:778166 466.848