Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00101 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCAGTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAAAGAGAGACACGAGTTACTGTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGGTGTTGTTCTTCAATTTGTAAAAATGAAAAATTTTAAAGGGTTTTAA 657 0.3683 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSINEGNVYMLENLSVAVNSGKYKPTMHEFRMFFKRETRVTVVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYGVVLQFVKMKNFKGF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00101 218 Gene3D - 8 115 IPR012340 -
Sebi5g00101 218 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Sebi5g00101 218 SUPERFAMILY Nucleic acid-binding proteins 122 217 IPR012340 -
Sebi5g00101 218 CDD RPA1_DBD_A_like 21 109 - -
Sebi5g00101 218 SUPERFAMILY Nucleic acid-binding proteins 16 115 IPR012340 -
Sebi5g00101 218 Gene3D - 116 218 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00101 Sebi-Chr5 2016349 2017494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00101 20 217 Core DNA Replication Machinery Family AT2G06510 26.699 1.99e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00101 - - aip:107647757 250.366