Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00099 ATGCTAGTGCCTGTGAGTTTGTGCAAAACTGCTGCTAGGAAAGTTGTTGAAGAGCTTGCATCTCTACTCAATCAGAAGTATATCTCATACTCATCCTTCGAGGATGACTTTAACAAGCTTAAGAGCAACTTGAAAGCTATTTCAGCAGTTCTTCTTGATGCAGAAAAAAAGCAGGAGAAGAGCCACTTGATTCAGGATTGGTTGAGGGAGCTCCAACATGCTTTGCACGATGCAGAAGACTTGTTGGATGATATAAACGCAGAAGCTTTGCGGCAGAACGTGGAGGCTGAATGGCGCATGGTGAGTTGGGTAAGAAACTTCTACTTCCTTTCTGGAATGGGTTATAGAGTTAAGAAAATTCAAGGGAGAATAGATGACATAGCAAAACAGAGAAGGAGTCTTTGCTTGCAGGAGCTGAATCATGATGTGATTGTTCCCCAGAGGGAGCACAAACCCTCATATCTGCGCTTCACAGAGGTTGTTGGAAGAGAAGAAGACAAGAAAGAGGTCATAGAACGGTTATTTAGTGGTAGTAACAATGGTGAGAGTGTTTTGGTTGTTCCTATAGTGGGAATTGGGGGGTTGGGAAAGACTGCACTTATCCATTTGGTTTTTGGTGATGAAAGGGTCAAGAGGGGTTTTGATTTGAGGATTTGGGTAGATGTGTCTGATGATCTGAATCCAGAGAAGATAAGGCAGAAGAAAATTATCAGAGCTGTAGATGGTTTAGATAAGAGTGTCAGTGGCATGGATTTCTTGTCATGCCTGCAAGATAAAGTGAGAGAGAAGAGATTTTTACTTGTTCTAGATGATGTTTGGAATTGCAATAGGGTAGAATGGCTTGATTTGAAGAATTTGTTAGGAAATGGTGCAAGAGGAAGCAGGATTCTAGTGACAACACGGTACAAAAATACTGCATCCATCATTAGTGAGAATAATCTGTATCAGTTAGGTGCTTTGGCTCATGGTCACTGCATATCACTGTTTGAGAAATGGGCATTTGGAGAGGGAGAAAGTGCTCAGCATCCAAATCTTGTGAAAATTGGTCAAGAGATAGTGATCAAATGTGGTGGAGTGCCTTTAGCAATACGCACTGTGGGAGGCTTGTTGTCTGGACGCAAAGAGGAATCCTATTGGCTGTATGTGAAAAATAGTGATACTTGGGGTGTGAGCCATATGCCTGAAAGGGAAGATGGTATCTTGTCAGTGCTCAGGTTAAGCTATGATCAATTGCCATCCCATTTAAAAGAATGCTTTGCATATTGCTCCTTACTTCCCAAAGGCCAAGAATTTGATAAGCAAGATTTGATCCACCTATGGATGGCTCAAGGTTTCATTCATTCCTCTGGCCAAGATCAGGAATTAGAAGATGTTGGAAGTTGGTATGTCAATGAATTTGTGTCCAGATCTATCTTCGATGTTGTACGTGAGAATCGTAAAACTGAAATTGTGAAGTGCAGGATGCATGATCTATTGCATGATCTTGCTAAATCAGTTGCAGGAAGCTTGATGGTTAACTCTGATACTACAAATATGTCTGACAGCACCAGGCATGTGGCATTTTGGGATCAGGACCTTACAGAAGATCCAAGTTCATTTCTCAAGTTACCAAAGTTGAGATTGAGAACAATTCTTTGGCATACCAAATGGGGAATCTCCATAAGGTCAGGATCCCATTTGAATGTCCTTCTCTCTGGTTCAACTTACTTGCGTGTGTTGAATTTGAGCAACTCAGGCCTAAAACAACTACCAAACAGCATTGGTAACATGAAACATCTGAGGTATCTAAATCTAAATGGTAACATTGACCTTCAGTCCCTTCCTGATTCCATTTGTGGGCTGCATTTTCTACAGACTCTGAAGTTATCAGGCTGCAGAAGAATTAGTACCTTCCCTAAATATTTCAGCCACTTAGTCTCACTCAGATATTTGGTAATAACCTCTCCATATGTTTTGGAGAAACAACTTGGGACTTTGACATCCCTCCGGTGTTTAACGATTGAACATTGTAGAAATCTTGTGTCTTTGACTGAAGTGACACAGCACCTCATTGCCCTTCGATCACTACATATCCACAACTGTATTAAGTTAACTTCGTTGCCAAGTAGCTTGAAAAACTTTACTGCCCTTGAGAATTTGGAAGTTGTCAACTGCCCCAAGATGGAATCATTGGAGGTGTGCATGCAAGATCTTCATAGATTTCGTTCTTTAACCATCAAAGGTCTACACAAATTGACAACTCTACCAGACAAGCTTGAATGCTATGCCAGCAGTCTTCAGTATCTGTTCATAATAGATTGCATTAGTCTTATGAAACTACCCGAATGCCTGGGGAATCTCTCATCACTGATGCGTATCTACATTAGTTATTGCCCCAACCTGCTAAATCTGCCATATGGGTTCTGTCACCTTACTGCTTTACAAGTTTTGCAAATTGATGGATGTCCCCTTTTAAGCACAAGATGCCGAAGAAATGTTGGTGAGGATTGGCAACAGATAGCTCATGCTAAGGATATGCAAGAAAAGGGTGACCCCCCAGTATCTGATAGCATGACTCACAATCTTGGGCCTGAAATATTGGTGTCTCCAGACCAGAACCAAGATCCTGTGCATGGGGAATGGATGGTTGTCACCAGGGGGAAGAAACAGAATCCAAATCGCAACAAAGGGAAATCTGTAAGCAAAAGTTACTCTGACACATTCAAGAATACCCTGAGCCAATCCAAGACATCAACAGACAAACTGGGAAGTGGAAGTAATTTGGATAAAGGTATCTCTGATAACTCCAAGACTGTTATGGGCCAATCTACGACTATAACAGGCAAACTTGGGAGTGGTGGTACTTTGGATCAAGGGGTAACCTTCAATAGCAAAGCGATGCCATCTGCCTCTAAGATCAATACAAGGAAGAAGAGACTCAGGGTTGATACATCTTATAAACCTGCTCAATCAACACCAAACCATGATGGGTCTTCCAAGACAAGCTTAAAGATTTCTGCAGGTAAATCCAATCAAGCTGAGAAGAGTGCCTCTGGTTTAGTGAATTATGGTATCAAAACAACCCTGGATGTAGATATCATTTCTGCAAACAGAATGAGGTTCAGGGATGTGGACAATCCAAATCATGATATGAGCATGGATAAAAATGAGGAGGATCCTGATGAAGAATTGGAGAATGAATCTAATGATGACATGCATGAGGATGACCAGACCTTGCTGCATCAAGCATCTAAACCAGAATCCTCATGA 3249 0.4149 MLVPVSLCKTAARKVVEELASLLNQKYISYSSFEDDFNKLKSNLKAISAVLLDAEKKQEKSHLIQDWLRELQHALHDAEDLLDDINAEALRQNVEAEWRMVSWVRNFYFLSGMGYRVKKIQGRIDDIAKQRRSLCLQELNHDVIVPQREHKPSYLRFTEVVGREEDKKEVIERLFSGSNNGESVLVVPIVGIGGLGKTALIHLVFGDERVKRGFDLRIWVDVSDDLNPEKIRQKKIIRAVDGLDKSVSGMDFLSCLQDKVREKRFLLVLDDVWNCNRVEWLDLKNLLGNGARGSRILVTTRYKNTASIISENNLYQLGALAHGHCISLFEKWAFGEGESAQHPNLVKIGQEIVIKCGGVPLAIRTVGGLLSGRKEESYWLYVKNSDTWGVSHMPEREDGILSVLRLSYDQLPSHLKECFAYCSLLPKGQEFDKQDLIHLWMAQGFIHSSGQDQELEDVGSWYVNEFVSRSIFDVVRENRKTEIVKCRMHDLLHDLAKSVAGSLMVNSDTTNMSDSTRHVAFWDQDLTEDPSSFLKLPKLRLRTILWHTKWGISIRSGSHLNVLLSGSTYLRVLNLSNSGLKQLPNSIGNMKHLRYLNLNGNIDLQSLPDSICGLHFLQTLKLSGCRRISTFPKYFSHLVSLRYLVITSPYVLEKQLGTLTSLRCLTIEHCRNLVSLTEVTQHLIALRSLHIHNCIKLTSLPSSLKNFTALENLEVVNCPKMESLEVCMQDLHRFRSLTIKGLHKLTTLPDKLECYASSLQYLFIIDCISLMKLPECLGNLSSLMRIYISYCPNLLNLPYGFCHLTALQVLQIDGCPLLSTRCRRNVGEDWQQIAHAKDMQEKGDPPVSDSMTHNLGPEILVSPDQNQDPVHGEWMVVTRGKKQNPNRNKGKSVSKSYSDTFKNTLSQSKTSTDKLGSGSNLDKGISDNSKTVMGQSTTITGKLGSGGTLDQGVTFNSKAMPSASKINTRKKRLRVDTSYKPAQSTPNHDGSSKTSLKISAGKSNQAEKSASGLVNYGIKTTLDVDIISANRMRFRDVDNPNHDMSMDKNEEDPDEELENESNDDMHEDDQTLLHQASKPESS 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00099 1082 Gene3D - 11 125 - -
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 978 1009 - -
Sebi5g00099 1082 Gene3D Ribonuclease Inhibitor 502 833 IPR032675 -
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 1036 1082 - -
Sebi5g00099 1082 Pfam Leucine rich repeat 569 626 IPR001611 GO:0005515
Sebi5g00099 1082 SUPERFAMILY L domain-like 487 819 - -
Sebi5g00099 1082 Pfam NB-ARC domain 163 409 IPR002182 GO:0043531
Sebi5g00099 1082 FunFam Probable disease resistance protein At1g63360 408 498 - -
Sebi5g00099 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 422 IPR027417 -
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 877 948 - -
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 1049 1065 - -
Sebi5g00099 1082 Gene3D - 148 314 IPR027417 -
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 881 948 - -
Sebi5g00099 1082 PRINTS Disease resistance protein signature 356 370 - -
Sebi5g00099 1082 PRINTS Disease resistance protein signature 186 201 - -
Sebi5g00099 1082 PRINTS Disease resistance protein signature 657 673 - -
Sebi5g00099 1082 PRINTS Disease resistance protein signature 259 273 - -
Sebi5g00099 1082 Coils Coil 64 88 - -
Sebi5g00099 1082 CDD RX-CC_like 15 129 IPR038005 -
Sebi5g00099 1082 Gene3D - 319 407 IPR042197 -
Sebi5g00099 1082 PANTHER DISEASE RESISTANCE PROTEIN RP 64 820 IPR044974 GO:0006952
Sebi5g00099 1082 MobiDBLite consensus disorder prediction 960 1009 - -
Sebi5g00099 1082 Gene3D - 408 499 IPR036388 -
Sebi5g00099 1082 Pfam Rx N-terminal domain 13 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00099 Sebi-Chr5 1995908 2001464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00099 187 765 WRKY Transcription Factor Family AT5G45050 23.065 1.60e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00099 - - lang:109363325 1095.11