Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00080 ATGTTGATATTAATTCTTGGACTAGCCTCAGCTGCTTTTTTAGTGATTGTTTCACTTTATGTCTTCTTTTACCGGAAAAGGCCTTCAAATCATGAGGTTAAAGACATAGAAAGCTCAGAAGATAAGAAGGAAGAGATAGCTCAGAAGGAGGACTTGTTCACCTTTCAAGGTGGGGAGGACTTGACAATATGTGATGTATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAATTATGCCACACTGTATAAGGCTTTGTTGCAGAGGAGCAACAAAGTGAGGCTGCTGAGGTTTCTGAGACCAGTATGCAGTACAAGAGCTGAAGAATTGGATCAAATGATTCAGTTTCTTGGAAGGATAAGGCATCCTAATTTGGTTCCCCTTCTGGGGCATGGGAATCTGACTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATATAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACAGGACATGAGAAGCCAATTATCCATGGAAACCTCAAGTCTAAAAACATCCTTTTGGATCGCTCCTACCAACCATACATCTCAGATTCAGGACTCCATCTTCTGTTGAATCCTACAGCTGGCCAAGAAATGCTTGAAAGTTCAGCTGCTCAGGGTTATAAAGCACCTGAGCTTATCAAAATGAAGGATGCTAGTGAAGATACTGATATATATAGCCTTGGGTGGCAAATGAATTTTTGTGATGTTACCCATCCTGGTACTATTCTCGCCATAACTGGTATAACAGCAGAGTTTTGA 795 0.4063 MLILILGLASAAFLVIVSLYVFFYRKRPSNHEVKDIESSEDKKEEIAQKEDLFTFQGGEDLTICDVLDAPGEVIGKSNYATLYKALLQRSNKVRLLRFLRPVCSTRAEELDQMIQFLGRIRHPNLVPLLGHGNLTQFIRDGNGECYKWSNIYRISIGIAKGLEHLHTGHEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEDTDIYSLGWQMNFCDVTHPGTILAITGITAEF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00080 264 Gene3D Phosphorylase Kinase; domain 1 65 132 - -
Sebi5g00080 264 Pfam Protein tyrosine and serine/threonine kinase 95 240 IPR001245 GO:0004672|GO:0006468
Sebi5g00080 264 ProSiteProfiles Protein kinase domain profile. 68 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi5g00080 264 SUPERFAMILY Protein kinase-like (PK-like) 71 243 IPR011009 -
Sebi5g00080 264 Gene3D Transferase(Phosphotransferase) domain 1 133 244 - -
Sebi5g00080 264 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 42 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00080 Sebi-Chr5 1628161 1630450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00080 25 243 Carbohydrate Esterase AT5G61570 56.557 9.67e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi5g00080 PK_Tyr_Ser-Thr 5.9e-16 CL0016