Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00063 ATGAGTAGTGAGAGATATAGCTGGATCCATCTTTGGAATGATTCTGAATTCATTCAGGACATTGTCAAAGATGTTTTGCAAAAAGTGAAGTCAAGGTACCCAAATCAATTGAAGGGACAGGTTGGAATTGAGAAGAATTATGTACCAATTGAACGATCACTGGAAATAGGTACAAGTGAAGTTAGAATCATTGGAATATGGGGCATGGGAGGCATAGGGAAGACCGCCATTGCTACTACTTTATATGCCAAATTGTCTACTCAATTTGAAGGGCATTGCTTCCTTGCAAATGTAAGGGAACAATCAGACAAGAAAGGACCCAGTGCTTTACATAATGAACTTCTTTCTAAATTGTTAGAGGAAGAATGTCTTAGTCTTCATACACCCAAAGTAGAAACCCCTTTCCTCATGAGTAGGCTTGCACCAAGTGGGATAGAAACCCTTATAGACAAAGCTCTCATAACCATTTCACATTACGAGACAATAGAAATGCATGACTTAATACAAGAAATGGGGCGGGAGATTGTTAACCAAGAATCTATCAAAAACCCTGGGGAACGAAGTCGATTGTGGAAAAGTGAAGAAGGGTTTGATGTATTGAAAAATAACAAGGGAACTGAAGCTGTTGAAGGCATATTTTTCAATATGTCTGATGTTGAGAAGATTCTGCATTTGAGCTCTGATTCCTTTAAAAGAATGACTAACTTGAGATATCTCATAATCTATAATGGGAAGATTCATGGACCTAAGTCTTTGCCATCTACCTTTTCTGCTGAAATGCTTGTAGAGTTTTCCATGCCTTACAGCAAGCTTAAAAAGCTTTGGGATGGAGTTCAGGAAATTTCAGTGATATCAAAGGAAATGAGATGGCTAAATGTAACTAACACCGCCATACGTGAATTGCCACCATCAATTTGGCATAATAGCCAACTCACTGATCTTGAGCTACGAGGCTGTGGCAATCTTAACATTACTAGGAACAAGTTATCTAATCATCCAAGATTGTGGTCTCTCACAGTGCTGGACCTTAATGGTTGCACACAAATCGATGCATTGGATCTGCAGTTCATCTTTGATGTCTTGCCACGTTTAGTAAAGCTAGATTTGTCAAACTGCTCCAACATAAGAGCACTCCCTGACAACACCAAAAACCTTTCAACGTTGAGAGAGCTTAGGTTAAATGATTGTAGGAATCTTGTGTCTCTACCAGAGCTTCCATCATCCCTGGAAGAGTTGGAAGCCTTGAATTGCACTTCTTTAGAGGGAGACTTCACTCATAGGCTAGTGAATGAGCACATTGTTCAAAACATGCCCTGCTCATACTATTCTGATTTTTATCTCAGTAAGCGTGCTTCATCGGTAACAAGAACTTCACCCACTTCCTAA 1386 0.3954 MSSERYSWIHLWNDSEFIQDIVKDVLQKVKSRYPNQLKGQVGIEKNYVPIERSLEIGTSEVRIIGIWGMGGIGKTAIATTLYAKLSTQFEGHCFLANVREQSDKKGPSALHNELLSKLLEEECLSLHTPKVETPFLMSRLAPSGIETLIDKALITISHYETIEMHDLIQEMGREIVNQESIKNPGERSRLWKSEEGFDVLKNNKGTEAVEGIFFNMSDVEKILHLSSDSFKRMTNLRYLIIYNGKIHGPKSLPSTFSAEMLVEFSMPYSKLKKLWDGVQEISVISKEMRWLNVTNTAIRELPPSIWHNSQLTDLELRGCGNLNITRNKLSNHPRLWSLTVLDLNGCTQIDALDLQFIFDVLPRLVKLDLSNCSNIRALPDNTKNLSTLRELRLNDCRNLVSLPELPSSLEELEALNCTSLEGDFTHRLVNEHIVQNMPCSYYSDFYLSKRASSVTRTSPTS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00063 461 Gene3D Ribonuclease Inhibitor 177 428 IPR032675 -
Sebi5g00063 461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 122 IPR044974 GO:0006952
Sebi5g00063 461 SUPERFAMILY "Winged helix" DNA-binding domain 140 201 IPR036390 -
Sebi5g00063 461 SUPERFAMILY L domain-like 222 426 - -
Sebi5g00063 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 125 IPR027417 -
Sebi5g00063 461 PRINTS Disease resistance protein signature 359 375 - -
Sebi5g00063 461 PRINTS Disease resistance protein signature 63 78 - -
Sebi5g00063 461 Gene3D - 22 141 IPR027417 -
Sebi5g00063 461 Pfam Leucine Rich Repeat 261 279 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00063 Sebi-Chr5 1255027 1257470 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00063 141 421 WRKY Transcription Factor Family AT4G12020 32.070 3.97e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00063 - - gsj:114410062 188.734