Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00062 ATGACTAAGATGAGATTTCTTAAATTCTATGCTGGGAAGTGGAGTGACAGATGCCATATATACCTTCCCAACGGTCTTCAATCATTGTCTGACAATTTAAGGTACCTTCAATGGCATGGATATTGTTTAGTGTCTTTGCCATCAACCTTTAGTGCTAAATGGCTTGTTGAGCTTTCCATGCCCTACAGCAACCTTGAAAAGCTTTGGGACGGTGTTCAGGATCTTGTGCATTTAAAGGAAGTTGACCTTAGGTTCTCCAAAAACCTGGTTGCAGTCCCGGACTTATCAATGGCCACAAATCTTGAAGGGTTATCTCTTCTTCATTGTAAAAGTTTGCGTCAAGTTCATCCATCCATTTTGTCTCTCCATAAGCTCAAATATTTGGATTTAGAAGGTTGCACAGAGATTGAAAGCCTTCAAACTGACATTGATTTAGAATCTCTCTGTGACCTCCGTCTCAGCCACTGCTCAAACCTGAAGGAATTTTCAATCTCCTCAAAGAACCTGGTGAGATTGTGGCTAGGTGGTACAGCTATCCAAGAATTTCCTTCATCAATTTGGCGCTGTAAGAGACTTCAACTTATTAATCTAGAAGGTTGCGTCAATCTTGACAGTGTTGGGAATCAGTTATCTCCTGATCTAGGAATGGGATCTCTTGGAGTCCTGGTCCTATCTGGGTGCAAACAACTGAACGCATCAAATTTATGTTGTATTCTTGATAGGCTGCTGTTTTTAAAGTGGCTAAGTATGGAAGATTGTTGCAACTTACAAGCACTCCCTGATAGCATTGGCTTCTTAAAATCATTAGAGAGCTTAAAACTAAGTGGAAGCAATGTTGAGAGCTTGTCTGCAAATGTCAAAAACCTTTTGAAGTTGAGAGAGCTTTGGTTAGACAATTGCAAGAAACTTGTGCAGCTGCCAGAGCTTCCACCTTCCCTACAAATATTAAGTGCCGTTAACTGCACATCTTTGGAGACAGACTTCACTCAACAGCTAGTGCTAGAGAAAAACATATCCTTTTCACTTAAACATGGACTTAAAGAACGTCCTAGATTTGCTTTCCTCCCTGGAGCCCAAATTTCAGGTAGGTTTAGCTTTTTGGCTGAAGGGACTTCAATAACTGTATCTCATCTTCCACAATCTGGCTTACACGGTTATATCCTTTGCCTCATTCTTTCTCAATCACCACCAAATGGTAAATATGCATATGTTAAATGTGTTATCGACAAAGATTCTGAAAGAACCGGTAGCAAATATACCTTTCCGATTAATCAGAGTTTGATTTCTGATCACGTGTTTCTTCGGTATATTGACATCAATAAAGGTGAGGATAATCCTTTTTATAGGGAAATGCAAAAAAGTGGAGTGTATGATTATTGCAACATATCATTTAAATTCAATCTTCATGGAGACAATGGAGAATGGTTGACAAATAGGATAAAGGGGTGTGGGGTCTACCCAGTGTATGCCTTTGAACATGGCTATTCCTCCAGACACAAGGGATCGGTGTTGGAGTTAGGTGGTGGTTCAAAAGATATCGCTGAGTTACAACCCAGAGCAATTGGATTTGAAGTCAAAGGATCTAAATCTAACCATGACAATGATGATAACCAGACTAAGAAATTACAGCAAGTTATGAACCAAGACAATATTACAACAGGTATGCAGCATAAAAAAGAGGACTTCAAAGGAAAATCACCATATCACCACTTCACAGAACATGGTTGTGAGGGACAACCAGAAAGTTTCAAGGATGAGGATTATCTGATGAGTTCAGTGCCCAAGAATGATATTATCCCCTCTGACACTCCAAGTGTTTCCTACATCGATTCAAATCAGACTATTGAAGTGTTTGAAGAAAAATACTTGATCGACAATCAAGTCAATTGTTTTGAGCCATTCATGTTTGAGAAAGCCCATACTTTTGTGGAGATTGACAATCAACCTCTTGAACCAGATTGGGATCCAATTGCTGAGCTCGAGAGCATGTTATGTGATAGTTATAAGTTGTCTGCCATATCCACTCAATCAACAACTATTTCAAACACTGAACAGGGTCCAAATGTGGGAACTATCCTTCAAAAATTAGAGATGCTTTTAGAGACCTCCCTTGAAATTATTTCTTCAGACAATGAAGTCAAGCAAAAATTCCATGATGTTCTGAAACAACTTGACCAATTTGAAGACCAAGTCCCTGTTAAACTCCATCATGTAATTTGCAAGTTAAAAACTTTCATTGAAGGTGTTGATGTAGGATTTGTGGCCGCCCAAAAAACCATCCAAGATTATGATCAGTTGCTCCAGTCTAGGTCTCTTCTATCAAAGCAATTGAAAAGTGCCAAAGCCCGACAAGACCAAATTAATTCAAATGTCTCTCAAGGTAAAATACAATTTGAAAAGATTAATTCTAAGATTGTTGAACTAGAACAAAAATTAAGTGATTTAGTTGAGACTAGAGACAAGCTAAAGAGAGCCTTGGATGATTATGATGTTGAAAAGAGTAAGCTGGTGTTTGAGGTAGCACAATGGGTTCCAGAATGCAAGACTGTCACCACGGCTTTGAAGAAGTCTGAGACTTCTTACAAAATGGCCCTAACCAATAAGAAGAAAACTGAAGATGAATGGGCTAACCTGAAGAAGAGCTTTGAAGACAATAAGATTTGA 2664 0.3885 MTKMRFLKFYAGKWSDRCHIYLPNGLQSLSDNLRYLQWHGYCLVSLPSTFSAKWLVELSMPYSNLEKLWDGVQDLVHLKEVDLRFSKNLVAVPDLSMATNLEGLSLLHCKSLRQVHPSILSLHKLKYLDLEGCTEIESLQTDIDLESLCDLRLSHCSNLKEFSISSKNLVRLWLGGTAIQEFPSSIWRCKRLQLINLEGCVNLDSVGNQLSPDLGMGSLGVLVLSGCKQLNASNLCCILDRLLFLKWLSMEDCCNLQALPDSIGFLKSLESLKLSGSNVESLSANVKNLLKLRELWLDNCKKLVQLPELPPSLQILSAVNCTSLETDFTQQLVLEKNISFSLKHGLKERPRFAFLPGAQISGRFSFLAEGTSITVSHLPQSGLHGYILCLILSQSPPNGKYAYVKCVIDKDSERTGSKYTFPINQSLISDHVFLRYIDINKGEDNPFYREMQKSGVYDYCNISFKFNLHGDNGEWLTNRIKGCGVYPVYAFEHGYSSRHKGSVLELGGGSKDIAELQPRAIGFEVKGSKSNHDNDDNQTKKLQQVMNQDNITTGMQHKKEDFKGKSPYHHFTEHGCEGQPESFKDEDYLMSSVPKNDIIPSDTPSVSYIDSNQTIEVFEEKYLIDNQVNCFEPFMFEKAHTFVEIDNQPLEPDWDPIAELESMLCDSYKLSAISTQSTTISNTEQGPNVGTILQKLEMLLETSLEIISSDNEVKQKFHDVLKQLDQFEDQVPVKLHHVICKLKTFIEGVDVGFVAAQKTIQDYDQLLQSRSLLSKQLKSAKARQDQINSNVSQGKIQFEKINSKIVELEQKLSDLVETRDKLKRALDDYDVEKSKLVFEVAQWVPECKTVTTALKKSETSYKMALTNKKKTEDEWANLKKSFEDNKI 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00062 887 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 208 IPR044974 GO:0006952
Sebi5g00062 887 Pfam Leucine Rich Repeat 55 73 IPR011713 -
Sebi5g00062 887 Coils Coil 798 832 - -
Sebi5g00062 887 Gene3D Ribonuclease Inhibitor 167 335 IPR032675 -
Sebi5g00062 887 Gene3D Ribonuclease Inhibitor 14 166 IPR032675 -
Sebi5g00062 887 SUPERFAMILY L domain-like 5 342 - -
Sebi5g00062 887 Coils Coil 763 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00062 Sebi-Chr5 1242029 1245426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00062 1 387 WRKY Transcription Factor Family AT4G12020 31.159 4.32e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00062 - - gsj:114380057 1014.6