Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00043 ATGGCGAAAACGAGGCCAGGGAAAAAGGACATGGACTCATACACCATCAGAGGGACCAACAAGGTCGTCAGAGCTGGAGACTGTGTTCTGATGCGGCCTACGGACACGTCGAAGCCACCCTACGTAGCGCGCGTGGAGAAGATCGAACAAGATAATAGGAGCAACGTGAGGGTACGGGTGAGGTGGTATTATAGGCCTGAAGAGTCGATTGGGGGTCGCAGACAGTTCCATGGTGCTAAAGAGCTTTTCCTCTCTGACCATTACGATGTTCAGAGTGCTCACACCATTGAAGGCAAGTGTATTGTGCATTCTTTCAAGAACTACACTAAGCTTGAGAATGTAGGTGCTGAGGATTACTATTGTAGATTTGAGTACAAGGCTGCTACTGGGGCTTTCACTCCTGACCGTGTTGCTGTGTGA 420 0.4976 MAKTRPGKKDMDSYTIRGTNKVVRAGDCVLMRPTDTSKPPYVARVEKIEQDNRSNVRVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00043 139 PANTHER OS08G0421900 PROTEIN 1 139 - -
Sebi5g00043 139 FunFam Chromatin remodeling protein EBS 1 132 - -
Sebi5g00043 139 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Sebi5g00043 139 SMART BAH_4 21 136 IPR001025 GO:0003682
Sebi5g00043 139 CDD BAH_BAHCC1 22 134 - -
Sebi5g00043 139 Gene3D - 3 137 IPR043151 -
Sebi5g00043 139 Pfam BAH domain 23 135 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00043 Sebi-Chr5 849895 850456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00043 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 2.99e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00043 K25868 - gmx:100800993 283.878