Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00011 ATGGTGGGCTCAGGAACAACAACAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAAATGTATGTCTCAACTCAGATTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGAGTCAGAGGTGGCAATGGGTGCAAGGTTGGGGATGATAATGGTAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGGGCTTCAGATTGTCTTGAAGAGCTTGATGGAGAGGATCCTGTCAGAAAATCCTTCAGCAAAATGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAACCTAATATTTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATAGATCAGTTTGAGTCAGGAATTCAGACAATAGCTGTAATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGATCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCACTAGGCTATCAATCTGGATTCTACCTCTCCCAACTCTTCTCTTCAACTAGGAACTCCTCCTCTTCTACTTCAATTCCTTCAAAACCATCCACCATTCCAATTGGTCCATCTCCTCCACTCCTCAACTGGGGTCAGAGGCCACTTGGGTCTGCTACTTCCATGCTATCCTCACCCAATTTTCAACATGCAGCCAGAATGGGGTTCCCACATGCCAAAGATGAGGCCCATATGTTTCTCATGCCTAATGCATCCGAAGCTGCAAGAAGGGAAGACATGATAGGGGAGCATGAAAAAAGTGACATAAAATGGCCAAATGGGTTGTCTTTCTTCAATGCACTCACTGGAAGAACTGATGATGCTAAGCTTTTGTTCAATCCAGAAAGCATGGGGAGCAAACTAGGTGAGCAAAATCTCCACCACCCTCTTAATCAAACTCCAAATTCAGCTGCCTCCAATGAGTTCTTGAGCTTAGATAACCACCCAGAAGGGACAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACACTACCTGCAAGAGTGGCTTCTTCAACTTCATCTACTTCAATGGATCACCATCAACAAACAGCTATGGAGTATAGGAATTCAGGAGGGGGTATGTACCCGGATGTCATGGAGACCTTTTTAGAGTGA 1191 0.4534 MVGSGTTTDRSKEAVGMMALHEALRNVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRASDCLEELDGEDPVRKSFSKMLMGKVTSDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSIPSKPSTIPIGPSPPLLNWGQRPLGSATSMLSSPNFQHAARMGFPHAKDEAHMFLMPNASEAARREDMIGEHEKSDIKWPNGLSFFNALTGRTDDAKLLFNPESMGSKLGEQNLHHPLNQTPNSAASNEFLSLDNHPEGTRKMDKFKRSFTLPARVASSTSSTSMDHHQQTAMEYRNSGGGMYPDVMETFLE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00011 396 PANTHER GB|AAF34833.1 1 396 IPR044170 -
Sebi5g00011 396 MobiDBLite consensus disorder prediction 198 219 - -
Sebi5g00011 396 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 77 IPR025610 -
Sebi5g00011 396 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 93 178 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00011 Sebi-Chr5 249941 252220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00011 18 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 28.837 1.99e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00011 - - gmx:100789006 642.884