Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi5g00010 ATGGAGGTTGTGACTGACAAGTGCAAAGGTCAGAAGAAGCAAAATGACAATATAATAGTAATGATTGATTACACTTTACAACAACTGACATTGAAAAAGTTTTGGGCTCAATCTGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGCATACAACTCATGGCTTTCACTTGGTGAAGGGAAGATCAGATCACGAAATGGAAGACTATCATGTTGCTCAATTTAAGCAAATTGATAACAATGAGTTGGGTTTATTTGCAATATTGATGGCCACTCAGAGAAATCAGGTGAATTGGGTAGAGGGGGGTTCAACTGCAGTTACAGCAATATTGATCAATTGTCAGAAGCTAGTAGTGGCAAATATTGGTGATTCTCGGGCTGTCTTATGCAAGAATGGAGTGGCCAAACAACTATCAGTGGATCATGAACCAAACACAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGTGACGTTCCACGGGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTAAAGAAACATTTGAGCTCAGAACCATATGTGACAGTGGAGATAATAGATGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCCATCAGAAATATAAAGGATACTCGTTCTGCAGCAAAGTACCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCTTGCGTTGTCGTCAGATTTCAGTGA 783 0.4023 MEVVTDKCKGQKKQNDNIIVMIDYTLQQLTLKKFWAQSDPDSGKGKSKMSKHTTHGFHLVKGRSDHEMEDYHVAQFKQIDNNELGLFAILMATQRNQVNWVEGGSTAVTAILINCQKLVVANIGDSRAVLCKNGVAKQLSVDHEPNTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTVEIIDDDAEFVILASDGLWKVMSNQEAVDAIRNIKDTRSAAKYLTEEARNRKSSDDISCVVVRFQ 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi5g00010 260 Pfam Protein phosphatase 2C 51 252 IPR001932 -
Sebi5g00010 260 ProSiteProfiles PPM-type phosphatase domain profile. 1 259 IPR001932 -
Sebi5g00010 260 CDD PP2Cc 49 259 IPR001932 -
Sebi5g00010 260 SMART PP2C_4 6 257 IPR001932 -
Sebi5g00010 260 MobiDBLite consensus disorder prediction 41 61 - -
Sebi5g00010 260 Gene3D - 31 260 IPR036457 -
Sebi5g00010 260 PANTHER PROTEIN PHOSPHATASE 65 259 IPR015655 GO:0004722|GO:0006470
Sebi5g00010 260 SUPERFAMILY PP2C-like 51 259 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi5g00010 Sebi-Chr5 209651 211420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi5g00010 36 260 PP2C-type Phosphatase Gene Family AT3G15260 65.543 1.12e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi5g00010 K17506 - gmx:100787942 358.221