Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi59g00017 ATGATGCAAGAGAAAGATAATAGGAGTAATGAGGGTGATGGTGAAAATAACTTGAAATCCAGTAATGAAGTCACTGTTTGCTCTGATGAGGATGTTCCTGATGTTGATAAAAGGATTTCTGAGTTAAGTGATGATGATATTAGATTGCTTGAGTTTGATTTTCTTCAGGATGCATATGATTTCTATAGGGAAAGGAGTGAGAAGCATTTAAATAGGACAAATAGAATTAGTGAAGCTAAGGCCATTACTCGTACTAACTGTCTTGCGAGGATTCGATTGTATCTGGACAAAGATAGTAGCAAGTGGAGGGTTGGAATGTTTGAGCCAGATCACAACCATGAGCTAACTCCTTCTACTATGGTACATTTGTTACCCAAATATCGTGGTTTGAGTGTTGCTGATAAGGAACAAGTAAACAGTCTTCACTTATACGGTGTAAGGACTTGTCATATAATGAGGCTAATAATGGGTCAGAAGGGTGGTCATTCAGACCTTGGATTTTGTAATAAGGACTTGTACAATCACATTGACAAGGAGAATAGGGCCAAAATTGAGGATGGGGATGCTTTTACTGCATTGTGCTATCTTCAAGCAAAGCTATGTTCATGGCACCATCACCAAAATGCTTGTGAGAACGTAAAAAATCCGAAATTTCTTGAAGATTTTAAGATGTTGTTATATGCCAATTTTACTCCTGAGAGGTTTGAGGAAGAATGGTTGAAGGTTATTGAGAAACATGGTTTGAACAATAATAAATGGGTTAGGAAAGTGTATGACTTGAGGAGGATGTGGGCCACTATTTGTGAAGGTATTAATTCATTCATTAAGAGATATGTTCAGAGTAAAAACAATCTTGTTGATTTTCTTCACAATTTTGAGAGAGCACTGAATGAATATAGGCATAATGAGTTAAATTCTGATTACAAGTCTACATACACCCAACTTGTTTTGACAACTACTTTGGAAAAGTATGAAGTACATGCTTGTAATGTGTATACCAGGAATAAATTTTTTGATGTAAGAAAGGAGATTGAGAAAGTTGCTGCCTTGAATGTGGTTGATAGGTCAGAGATTTCTGCTATTTATAATGAAGATGGTGACACATCAAAAAAAGAAGTGTTGAGGTCTGGTGTTGTTGGTGCAGCCTGTAACAGGCTTAACAAGGCTACACATAAAAATCCTCATAATTTTGTGAAAAACATTGAGGCTATACATCATTTGGAAGATCAAATGGAAAGGCAAGATGGTGCTGATCTGAAAATTGGTGACATATCAAGGGTTGTTCGCGATCCAACAATTGTCAAAACTAAAGGTGCACCTCGTAAAAGTAAGAAAATGATGAAGAAAAGGAAATGCTCTTATTGTAAGCGTCCAGGTCACACAGTTAGGACATGCTCCAAGTTCTCAACTCGAGACCAGTTGCAAACCGTTGAAGAAGAGGAATCTTCTGTTGAGAGTGATGGAGACTCACTTGGTGTAACTGGAACTTATAATAATGAATCTTTAAACCATAGCAAAGGTGTTCAGAAATGTAATAAGAAGGCTAAACATGATGGTGTTGTGAAATTAACTCGGGAGTCAGTAAATGACAGAGACACTGTGGCGATAGCTGGTAATGAGGATTTCACACAGATGCACAATGATCAAAGGTTCTCTGGAATGTATCAATATCGACCATCTATGATACAACATTTCGCTCAAGTTCAGTTTAATAGCAGAGTACATGTGGTGCCCCAGTACCCTCATATACCCATTCAACATCCATTTCATAACTCCACAGGTTATCATGGAATGAATACATTTGCAAGTCATTCACAGAATTTTACAACTGTACTGAACGAGGTCGAGAGCAAAGCTGGTCTGAGCATGAAGTGTTTCAATCCAAGAGATAGTTGA 1896 0.375 MMQEKDNRSNEGDGENNLKSSNEVTVCSDEDVPDVDKRISELSDDDIRLLEFDFLQDAYDFYRERSEKHLNRTNRISEAKAITRTNCLARIRLYLDKDSSKWRVGMFEPDHNHELTPSTMVHLLPKYRGLSVADKEQVNSLHLYGVRTCHIMRLIMGQKGGHSDLGFCNKDLYNHIDKENRAKIEDGDAFTALCYLQAKLCSWHHHQNACENVKNPKFLEDFKMLLYANFTPERFEEEWLKVIEKHGLNNNKWVRKVYDLRRMWATICEGINSFIKRYVQSKNNLVDFLHNFERALNEYRHNELNSDYKSTYTQLVLTTTLEKYEVHACNVYTRNKFFDVRKEIEKVAALNVVDRSEISAIYNEDGDTSKKEVLRSGVVGAACNRLNKATHKNPHNFVKNIEAIHHLEDQMERQDGADLKIGDISRVVRDPTIVKTKGAPRKSKKMMKKRKCSYCKRPGHTVRTCSKFSTRDQLQTVEEEESSVESDGDSLGVTGTYNNESLNHSKGVQKCNKKAKHDGVVKLTRESVNDRDTVAIAGNEDFTQMHNDQRFSGMYQYRPSMIQHFAQVQFNSRVHVVPQYPHIPIQHPFHNSTGYHGMNTFASHSQNFTTVLNEVESKAGLSMKCFNPRDS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi59g00017 631 PANTHER OS01G0519700 PROTEIN 199 353 - -
Sebi59g00017 631 Gene3D - 431 477 - -
Sebi59g00017 631 MobiDBLite consensus disorder prediction 1 30 - -
Sebi59g00017 631 SUPERFAMILY Retrovirus zinc finger-like domains 438 469 IPR036875 GO:0003676|GO:0008270
Sebi59g00017 631 Pfam FAR1 DNA-binding domain 63 116 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi59g00017 Sebi-Chr59 734518 737551 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi59g00017 FAR1 7.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi59g00017 - - vvo:131629359 207.994