Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi59g00004 ATGGCTTTGTCAAACACACTGTTTCTTCTAGTATTGTCCTTATCTTTCCAATGTTCATCTTCTTCTTCATCATCCTTGAGAAAAGGCTCCTCCCTCTCAGTGGAAAAACCAGAAGACATTATCATTTCACCAAATGGCATGTTCTCTGCTGGCTTTTTTGCCATTGGTGAAAACACATATTCTTTTGCCATATGGTTCACTGAGCCAAATTTCCACAACCCCACCACTCTCATTTGGATGGCAAACCGTGACCAACCAGTGAATGGAAAAGCTCCAAGCTTTCCCTCTTACACAATGGTACACATTGTCTTGGTTGATGCTGCACTCAACAATGCATGGTCTTCAAACACTTTATCACCAGCCCCAGCAGAGTTGCATCTCAAAGATGATGGCAATCTTGTGTTAGTGAGTTGCAAGGAACCATTTTTGTGGCGAAGTTTTGATTTTCCAACAGATACTCTCCTTCCTGGCCAACCTCTTACTAGATATACAAAGCTTGTGTCTTCAAGAAGTGAGAGTAACCATTCCTCTGGTTTCTATAAGTTGTTTTTTGATGATGACAATGTTCTTGGTCTTCATTATGATGGTCCTGATGTTTCAAGCACTTATTGGCCTAAACCTTGGCTATTGAGTTGGGATGTTGGTAGGTCTAATTACAATAGTAGCAAGATTGCAGTGTTAAATTCTGTTGGTCTTTTCAATTCTTCAGATAATTTCACTTTTGTAACATCTGATTATGGCACTGTGCTACAAAGAAGATTGAATTGGATTCTGATGGTAATGTCAGAGTGTATAGTAGAAATAATGTGTCAGAGAAATGGCATAATTGGAAGGCTTAATCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCACAGGCTTTTGGTGTATGAGTACATGGAAAATGGTTCTTTAGCTGAAAATCTCTCATCTAACAAACTTGATTGGAGCAAGAGGTATAAAATAGCTCTTGGAACAGCAAGAGTTATAGCATATCTACATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAACATACTTTTGGATTCTAACTACCAGCCCAAAGGGACTAGAGGATACATGCACCTGAGTGGGTTTTTTAACTTGCCTATTACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACAGGAAAGAGCCCAACTACATGTATCCAAACTGTTGATGGAGAAGAGGCATATGATGGAGGCTGGTTTCATGGGTGA 1269 0.3956 MALSNTLFLLVLSLSFQCSSSSSSSLRKGSSLSVEKPEDIIISPNGMFSAGFFAIGENTYSFAIWFTEPNFHNPTTLIWMANRDQPVNGKAPSFPSYTMVHIVLVDAALNNAWSSNTLSPAPAELHLKDDGNLVLVSCKEPFLWRSFDFPTDTLLPGQPLTRYTKLVSSRSESNHSSGFYKLFFDDDNVLGLHYDGPDVSSTYWPKPWLLSWDVGRSNYNSSKIAVLNSVGLFNSSDNFTFVTSDYGTVLQRRLNWILMVMSECIVEIMCQRNGIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNKLDWSKRYKIALGTARVIAYLHEECLEWILHCDIKPQNILLDSNYQPKGTRGYMHLSGFFNLPITSKVDVYSYGIVVLEMITGKSPTTCIQTVDGEEAYDGGWFHG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi59g00004 422 SUPERFAMILY Protein kinase-like (PK-like) 274 406 IPR011009 -
Sebi59g00004 422 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 193 IPR036426 -
Sebi59g00004 422 SMART blect_4 23 150 IPR001480 -
Sebi59g00004 422 Pfam Protein kinase domain 274 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00004 422 Gene3D Transferase(Phosphotransferase) domain 1 305 362 - -
Sebi59g00004 422 Gene3D Transferase(Phosphotransferase) domain 1 363 416 - -
Sebi59g00004 422 ProSiteProfiles Protein kinase domain profile. 208 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00004 422 Gene3D Phosphorylase Kinase; domain 1 262 304 - -
Sebi59g00004 422 Gene3D - 18 148 IPR036426 -
Sebi59g00004 422 SMART serkin_6 239 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00004 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Sebi59g00004 422 PANTHER OS07G0415500 PROTEIN 275 419 - -
Sebi59g00004 422 Pfam D-mannose binding lectin 76 163 IPR001480 -
Sebi59g00004 422 ProSiteProfiles Bulb-type lectin domain profile. 17 148 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi59g00004 Sebi-Chr59 385191 387363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi59g00004 210 401 Receptor kinase-like Gene Family AT1G29740 35.088 2.72e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi59g00004 Pkinase 1.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi59g00004 - - gmx:100783758 352.443