Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi59g00001 ATGACCATGGCTTTCTCAATTTCTTCACTCTTTTTACTTGTCTTGTTATTTCCTTTCCAATCTTCATGTTCTTTATCATTATTGAACAAAGGCTCTTCCCTCTCAGTAGAGAAACATGTAGAAGACGTTATTGTCTCCCCAAATGGCATGTTCTCTGCTGGCTTCTTCCAACTTGGCCAAAACGCTTTTTCCTTTGCCATATGGTTCACAGAGCCTCACACTCAGAACCCCACAACTGTTGTTTGGATGGCAAACCGTGAAGAACCCGTGAATGGAAAGCGCTCAAAGCTTTCCCTTTTACATAATGGTAACATCGTCTTGGATGATGCAGGTCAATACAGAACTTGGTCTTCAAACACAAAATCAGACGCCCCAGTAAAGTTGGGTCTCAAAGACGACGGAAATCTTGTGTTACGTGAGCAGCAAGGAACCATTTTGTGGCAAAGCTTTGATTTCCCAACAGATACTCTCCTTCCTGGCCAACCTCTTACTAGATATACAGAACTTGTGTCTTCGAGAAGTCAGAGTAACCATTCCTCTGGTTTCTATAAGCTGTTATTTGACGATGACAACGTTCTTCGTCTTGTTTATGATGGTTCTGATGTTTCAAGTGCATATTGGCCATCACCTTGGTTACTAAGTTGGGAAGCTGGAAGGTTTAATTACAATAGCAGCAGAGTTGCTATGTTAGATTCTCTTGGAAGTTTCATTTCATCAGATAATTATACCTTTTCCACGTATGATAATGGCACGGTGATGCAGAGAAGATTAACCATGGATTCTGATGGCAACGTTCGAGTGTACAGTAGAAATGATGTTTCAAAGAAATGGTATATTTCATGGCAATTCATAGCTGACTCTTGCACCATTCACGGAATTTGTGGGGCTAATAGCACTTGCAGTTTTGATCGTAAGAAAGGAAGGAAATGCTCGTGTCTACCAGGGTACAGAGTAAAGAACCACAGTGATTGGTCTTATGGGTGTGAACCCTTATTTGATTTTATTTGCAACAGAAGTGAGTCTACCTTTTTGGAGATGCGCGGTGTTGAGCTCTACGGTACAACAGTAGTTACAAAAAATTTGCTGAATGGGAGGCGTTCTCCGGGTTTTGAAGGAGCAATTTACTTGAGACTTCCTAAAGGTAATAGCTTTTCTAAGCAAGAATCTGTGCGAACAGATGATCATGTTTGTTCTGTCCAGATTCCCAAAGACTATGCTAAAAAACAAACTTCTCGTTTTGTGAGGTTTTTTCTGTGGCTTGCCACTGCAGTTGGAGCTTTAGAAGTGGCATGTATTTTGGTTGTTTGGGGTTTGGTAGTTAGGACCCGCCAAAAGTCTGATGCAGATAAAGAGGGCTATCATCTTGCAGCAGTTGGATTCAGAAGATTTAGTTACTCTGAGCTGAAGAAATCCACAAAGGGGTTCAGTCAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTATACAAAGGTGTTTTGTCAGATCAAAGACATGCGGCAATAAAAAAGCTTTATGAAGCTAATCAAGTAGAAAGGGATTTCCTTGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGATATGTGGGGATATTGTGCTGAGGGAAAACACAGGCTTTTAGTATATGAGTACATGGAAAATGGTTCTTTGGCAGAAAATCTCTCCTCCAACACACTTGATTGGAGTAAGAGGTATAATATTGCTCTTGGAATGGCTAGAGTTCTAGCTTATCTGCATGAAGAATGCTTGGAATGGATTTTGCACTGTGATATAAAGCCTCAAAACATACTTCTGGATTCAAACTATCAGCCCAAGGTTGCTGATTTTGGCTTGTCTAAGCTAATAAACAGAAATAACCTCAACAATTCAAGCTTCTCAATGATCAGAGGCACTAGAGGATATATGGCACCTGAGTGGGTTTTCAATTTAGCAATAACCTCCAAAGTGGATGTTTACAGCTATGGAATTGTTCTCTTGGAGATGATAACCGGAAAGGGTCCAACAATGAATACTGAGACACTTGATGGAGCAGAAGCAGCATATAATGGAAGGCTGGGTAACATGGGTCAGAGAGAAAAAGAGGAGCACATCTTGGATGGAGCAAATCATGGATCCTGCAATGGGGCCAAATTATGA 2145 0.4107 MTMAFSISSLFLLVLLFPFQSSCSLSLLNKGSSLSVEKHVEDVIVSPNGMFSAGFFQLGQNAFSFAIWFTEPHTQNPTTVVWMANREEPVNGKRSKLSLLHNGNIVLDDAGQYRTWSSNTKSDAPVKLGLKDDGNLVLREQQGTILWQSFDFPTDTLLPGQPLTRYTELVSSRSQSNHSSGFYKLLFDDDNVLRLVYDGSDVSSAYWPSPWLLSWEAGRFNYNSSRVAMLDSLGSFISSDNYTFSTYDNGTVMQRRLTMDSDGNVRVYSRNDVSKKWYISWQFIADSCTIHGICGANSTCSFDRKKGRKCSCLPGYRVKNHSDWSYGCEPLFDFICNRSESTFLEMRGVELYGTTVVTKNLLNGRRSPGFEGAIYLRLPKGNSFSKQESVRTDDHVCSVQIPKDYAKKQTSRFVRFFLWLATAVGALEVACILVVWGLVVRTRQKSDADKEGYHLAAVGFRRFSYSELKKSTKGFSQEIGRGAGGVVYKGVLSDQRHAAIKKLYEANQVERDFLAEVSIIGRLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGMARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLINRNNLNNSSFSMIRGTRGYMAPEWVFNLAITSKVDVYSYGIVLLEMITGKGPTMNTETLDGAEAAYNGRLGNMGQREKEEHILDGANHGSCNGAKL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi59g00001 714 Gene3D Transferase(Phosphotransferase) domain 1 548 710 - -
Sebi59g00001 714 PANTHER OS07G0415500 PROTEIN 358 671 - -
Sebi59g00001 714 CDD EGF 288 321 - -
Sebi59g00001 714 Pfam Protein kinase domain 476 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00001 714 ProSiteProfiles Protein kinase domain profile. 473 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00001 714 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 208 IPR036426 -
Sebi59g00001 714 Gene3D - 152 280 IPR036426 -
Sebi59g00001 714 FunFam S-receptor-like serine/threonine-protein kinase 442 547 - -
Sebi59g00001 714 FunFam Putative receptor protein kinase ZmPK1 22 152 - -
Sebi59g00001 714 SMART blect_4 35 153 IPR001480 -
Sebi59g00001 714 ProSiteProfiles EGF-like domain profile. 284 322 IPR000742 -
Sebi59g00001 714 PIRSF SRK 1 713 IPR024171 GO:0004674
Sebi59g00001 714 SUPERFAMILY Protein kinase-like (PK-like) 454 678 IPR011009 -
Sebi59g00001 714 FunFam Os07g0541700 protein 548 634 - -
Sebi59g00001 714 FunFam Serine/threonine-protein kinase 154 281 - -
Sebi59g00001 714 ProSiteProfiles Bulb-type lectin domain profile. 25 151 IPR001480 -
Sebi59g00001 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Sebi59g00001 714 Pfam S-locus glycoprotein domain 232 319 IPR000858 GO:0048544
Sebi59g00001 714 CDD B_lectin 44 153 IPR001480 -
Sebi59g00001 714 ProSitePatterns Protein kinases ATP-binding region signature. 479 502 IPR017441 GO:0005524
Sebi59g00001 714 Gene3D Phosphorylase Kinase; domain 1 438 547 - -
Sebi59g00001 714 Gene3D - 25 151 IPR036426 -
Sebi59g00001 714 SMART serkin_6 473 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi59g00001 714 Pfam D-mannose binding lectin 79 165 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi59g00001 Sebi-Chr59 54695 56946 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi59g00001 463 677 Trihelix Transcription Factor Family AT5G38560 46.606 5.16e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi59g00001 Pkinase 3.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi59g00001 - - gmx:100784287 1081.63