Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi598g00031 ATGGATGATCTTTCGTCCAACCTTCTCTGCCAAGAAAACAAAACGTTCTTGACAGAGGAATTGGGAATCTTTCAATCAAAGCAAGATTGTGGTGTTTCAGAGGATGAGCATGTGGGTGTTTTGATTGAGAAAGAGATGAGTCTTGGGTTCAAAAAGGATGAAACTTTGGTGTTTGGGGAGTGGCTCAAACGTGCCCGTTTGGATGCAATCAATTGGATTCTCAAAAAAAGAGCAACATTGGGTTTTCGCTTTCAAACTGCTTATTTGTCTGTCACATACTTTGATCGATTCCTTTCAAGGCGTTCCATTGATGGTGAAAAGTATTGGGCAATTCGGTTACTATCAATTGCATGTTTTTCTCTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGGGCTATCAGAGTTTCAATTGAAAGATTATTCCTTTGAGGGAAAAGTCATACAAAAAATGGAACTTTTTGTGCTGAGTGCCTTGGAATGGAATATGGGTATTATCACTCCCTTTGCTTTTCTTTCTTATTTCATCACAAAGTTCTGCAACGAATCCCCACAAAGTGATATTTTTTCCAAGACCATACAAATCATCCTTACCACAATGAAAGAGATCAATTTAATGGATCACAAACCATCTGTTATTGCAGCTGCTTCTACTTTGGTGGCAATGGATCAGCAATTGACCATAGAAGAAGTGAAATTGAAGATCAGTTCAATTCCCCAACAGTTTCTTGAACCAGAAGATGTACTTGGGTGCTGTATTTTAATTCAAAGATTATACAAGGAGGACAAGCTTTTACATACACCCAATTCTTCACCTATTCAATCCAAGCCAATGGACATTGCAGAGAGCTCTCTAGTTACCTTTGCTGCTATGTCAAAGAGAAGAAGACTCACATTCATTGATGATGAAGAAAGTAGTGATGGGAAGGGTCTCCATCAGGAAAAGCCAAAATTTTGA 957 0.3908 MDDLSSNLLCQENKTFLTEELGIFQSKQDCGVSEDEHVGVLIEKEMSLGFKKDETLVFGEWLKRARLDAINWILKKRATLGFRFQTAYLSVTYFDRFLSRRSIDGEKYWAIRLLSIACFSLAAKMEECNVPGLSEFQLKDYSFEGKVIQKMELFVLSALEWNMGIITPFAFLSYFITKFCNESPQSDIFSKTIQIILTTMKEINLMDHKPSVIAAASTLVAMDQQLTIEEVKLKISSIPQQFLEPEDVLGCCILIQRLYKEDKLLHTPNSSPIQSKPMDIAESSLVTFAAMSKRRRLTFIDDEESSDGKGLHQEKPKF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi598g00031 318 FunFam Cyclin-D5-1 165 252 - -
Sebi598g00031 318 Pfam Cyclin, N-terminal domain 64 163 IPR006671 -
Sebi598g00031 318 SMART Cyclin_C_2 166 289 IPR004367 -
Sebi598g00031 318 ProSitePatterns Cyclins signature. 66 97 IPR006671 -
Sebi598g00031 318 Gene3D - 165 228 - -
Sebi598g00031 318 FunFam Cyclin-D5-1 61 164 - -
Sebi598g00031 318 SUPERFAMILY Cyclin-like 28 163 IPR036915 -
Sebi598g00031 318 CDD CYCLIN_AtCycD-like_rpt2 166 255 - -
Sebi598g00031 318 PANTHER CYCLINS 62 256 IPR039361 -
Sebi598g00031 318 SMART cyclin_7 71 157 IPR013763 -
Sebi598g00031 318 SUPERFAMILY Cyclin-like 149 237 IPR036915 -
Sebi598g00031 318 Gene3D - 63 164 - -
Sebi598g00031 318 CDD CYCLIN_AtCycD-like_rpt1 65 161 - -
Sebi598g00031 318 Pfam Cyclin, C-terminal domain 166 263 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi598g00031 Sebi-Chr598 529203 530597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi598g00031 8 238 Core Cell Cycle Gene Families AT4G37630 38.956 6.50e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi598g00031 K18811 - gmx:100780266 422.55