Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi598g00030 | ATGGGAACAGATATTCCGACGAATTACAGTTACATGACAGCAGGGATTACAAACGACGATTCCTCTTCCGCTTTCAGCGACTGCAACAGTGACAGATCTGGCGAATTCCCTACGGCTTCTTCCCAAACCCGACGCCTTCTCCTTTCTTGCGCTTCTGACAATTCCGACGATCTCATCCGTCAATTAGTCCTCGATCTCAACTCTTGTTCCATTGATGAACAAAAACAAGCCACCATGGAGATCAGATTACTCGCCAAGAACAAGCCAGAAAATCGCCTCAAAATCGCCAAAGCCGGCGCTATCACTCCCTTGATTTCCCTCTTATCCTCGCCGGACCTTCAGCTTCAAGAATACGGTGTAACGGCGATTTTGAATCTCTCCCTCTGCGACGAGAACAAAGACCTAATTGCTTCGTATGGAGCAATTAGGCCTCTGGTTCGAGCACTGAAAACAGGGACTCCAACTGCCAAGGAGAATGCATCGTGTGCTTTGCTTCGTCTCTCGCATACGGAAGAGAACAAGGTTGCAATTGGAAGGGCGGGAGCGATTCCTCTACTGGTGAACCTTCTAGAAAGCGGCGGTTTTCGCGGGAAGAAGGACGCGTCGACGGCGCTGTATTCGCTGTGTTCGGTGAAGGAGAACAAGATGAGGGCGGTGAATGCGGGGATAATGAAGCCGTTGGTGGAATTGATGGCGGATTTAGGGTCGAACATGGTGGATAAGTCGGCGTATGTTTTGAGTGTGCTGGTGACGGTGGGAGAGGGGAAGAGGGCGTTGGTGGAGGAAGGAGGGATTCCTGTGTTGGTGGAGATTGTGGAGGTTGGGACGCAGAGACAGAAGGAAATTGCGGTGGTTATTTTGTTGCAGATTTGTGAGGAGAATGTGGCTTACCGTACTATGGTGTCTCGAGAAGGAGCCATTCCTCCCTTGATTGCTTTGTCGCAGACCGGCACCAATCGCGCCAAGCAAAAGGCGGAGACACTAATAGAGCTTCTACGGCAACCAAGATCCGGCAACGGTGCTGGCCGTAGCTCAGAAGTGTCAGCATAA | 1050 | 0.5105 | MGTDIPTNYSYMTAGITNDDSSSAFSDCNSDRSGEFPTASSQTRRLLLSCASDNSDDLIRQLVLDLNSCSIDEQKQATMEIRLLAKNKPENRLKIAKAGAITPLISLLSSPDLQLQEYGVTAILNLSLCDENKDLIASYGAIRPLVRALKTGTPTAKENASCALLRLSHTEENKVAIGRAGAIPLLVNLLESGGFRGKKDASTALYSLCSVKENKMRAVNAGIMKPLVELMADLGSNMVDKSAYVLSVLVTVGEGKRALVEEGGIPVLVEIVEVGTQRQKEIAVVILLQICEENVAYRTMVSREGAIPPLIALSQTGTNRAKQKAETLIELLRQPRSGNGAGRSSEVSA | 349 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi598g00030 | 349 | PANTHER | U BOX DOMAIN-CONTAINING | 58 | 333 | - | - | |
Sebi598g00030 | 349 | Gene3D | - | 198 | 336 | IPR011989 | - | |
Sebi598g00030 | 349 | Gene3D | - | 22 | 195 | IPR011989 | - | |
Sebi598g00030 | 349 | SUPERFAMILY | ARM repeat | 56 | 329 | IPR016024 | - | |
Sebi598g00030 | 349 | FunFam | RING-type E3 ubiquitin transferase | 47 | 338 | - | - | |
Sebi598g00030 | 349 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 99 | 141 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | SMART | arm_5 | 211 | 251 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | SMART | arm_5 | 170 | 210 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | SMART | arm_5 | 252 | 292 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | SMART | arm_5 | 88 | 128 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | SMART | arm_5 | 129 | 169 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | Pfam | Armadillo/beta-catenin-like repeat | 89 | 127 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | Pfam | Armadillo/beta-catenin-like repeat | 130 | 168 | IPR000225 | GO:0005515 | |
Sebi598g00030 | 349 | Pfam | Armadillo/beta-catenin-like repeat | 171 | 210 | IPR000225 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi598g00030 | Sebi-Chr598 | 499117 | 501810 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi598g00030 | 40 | 343 | U-box Gene Family | AT2G23140 | 48.684 | 1.89e-83 | 263 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi598g00030 | - | - | mnt:21388741 | 548.895 |