Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi598g00001 ATGCAGACTCGTGCTGTATTAGGGGAACTCCCCAATTCAACTAATGTTATTAAAGATAAATCCAAAACCTTGAATCCCAAATTGAAGAAAACACCTGCAACCACAAAGACCAAGACAGTGGATAAGAAAGCCAGCAAAGACGTTGATTCAGAGTCAACTACTCATGATAGCCTCTTTATTACCTCCGTGAAATGGAGGTTCTTATCTGTGAACCCTGTCACTAAATCCAGGCTTCAATTGTCGGGTGTTTCCTCCATGCTCATTGCATCAAAGTATGAAGAAATTAATCCACCCCATGCCGAACAGTTCTGCAACATTACTGATAACACATATGACAAGGCAGAGGTTGCGAAAATGGAAGCTGACATACTCAAGTTACTAAAATTTGAACTGGGGAGCCCTACTGTTAAGACTTTCTTAAGGCAAGAGAGGTTTATTGGTATTGCTTGTGAGACTAAAAATGCTCCAAGTTTGCAGTTTGAGTTTCTGTGTTACTATCTTGCTGAACTAAGCCTGTTGGACAATCATTGTGTTAAGTTTTTGCCTTATTTTGTGGCTGCAGCTGTAGTATTTCTTGCTAGATTTATTGTTTGGCCTGAAGTTAATCCTTGGGTAGGTACATCAGCACTGCTTGAGTGCACTGGGTATATATCACTTCAACTGAGAGAATGTGTTTGCATCTTACATGATCTGTATATGGCAAGAAGGGGAGGATCTTTCCAAGCTACTAGAGAGAAATACAGTCAGCACAAGTTTAAACAAGTGGCAAACATGCCTTCGCCTCTACACTTACCAAATGATCTCTTTGAATATTAG 816 0.4007 MQTRAVLGELPNSTNVIKDKSKTLNPKLKKTPATTKTKTVDKKASKDVDSESTTHDSLFITSVKWRFLSVNPVTKSRLQLSGVSSMLIASKYEEINPPHAEQFCNITDNTYDKAEVAKMEADILKLLKFELGSPTVKTFLRQERFIGIACETKNAPSLQFEFLCYYLAELSLLDNHCVKFLPYFVAAAVVFLARFIVWPEVNPWVGTSALLECTGYISLQLRECVCILHDLYMARRGGSFQATREKYSQHKFKQVANMPSPLHLPNDLFEY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi598g00001 271 SMART cyclin_7 144 230 IPR013763 -
Sebi598g00001 271 SMART cyclin_7 38 125 IPR013763 -
Sebi598g00001 271 Pfam Cyclin, C-terminal domain 134 260 IPR004367 -
Sebi598g00001 271 SMART Cyclin_C_2 134 261 IPR004367 -
Sebi598g00001 271 SUPERFAMILY Cyclin-like 134 261 IPR036915 -
Sebi598g00001 271 SUPERFAMILY Cyclin-like 66 131 IPR036915 -
Sebi598g00001 271 FunFam Cyclin A1 121 257 - -
Sebi598g00001 271 MobiDBLite consensus disorder prediction 1 36 - -
Sebi598g00001 271 Gene3D - 47 126 - -
Sebi598g00001 271 MobiDBLite consensus disorder prediction 1 33 - -
Sebi598g00001 271 Gene3D - 127 264 - -
Sebi598g00001 271 Pfam Cyclin, N-terminal domain 66 131 IPR006671 -
Sebi598g00001 271 PANTHER CYCLINS 66 249 IPR039361 -
Sebi598g00001 271 PIRSF Cyclin_A_B_D_E 55 268 IPR046965 GO:0016538|GO:0044772
Sebi598g00001 271 PIRSF Cyclin_A_B_D_E 2 64 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi598g00001 Sebi-Chr598 7821 9552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi598g00001 56 270 Core Cell Cycle Gene Families AT1G47230 56.221 1.83e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi598g00001 K06627 - gmx:100776007 282.337