Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi597g00014 ATGTCTCGCCGTGGTGGTGGTAGGCAATCCCAATCTCGCTATGATCAACCTTCTCCGGCCCAGTCTGCCGGAAGAGGCCGTGGTCGCGGCCGTGGACATGCACCTCCTCCGCCGTCGTCCGTTCCTATTCCGTCTCCGGCGATCGGTTATTCATCTGCCGCAGCGCCTGTTGCTGCCTCAAGTTCATCGTCCGTTCCTCTTCCGTCTCCGGCGATCGATTCTTCCTCCGCTGCAGCGCCAGTTGTTGCCTCAAGTTCGTCGTCTCCGCTGCCGTCTCCAGTTCCGGTTGAAACTCTGACTTCAGAGGTTGAGCAGAAGCTCACATTGCAGCCGCCGGCTCCGTCGTCGGCGAAGGCTATCAGGTTCCCTGACCGGCCAGGTTACGGTAAAGCGGGAAGGAAAATCCAAGTCCGGGCGAATCATTTTCAACTGCAAGTTGCTCAGTGTGATCTACATCACTATGATGTATCGATAACTCCGGAGATTCCTTCGAAGAAAGTGTCTAGAGATGTGCTGGGCCAGTTAATCCGCATGTATCAAGAGTCACACTTGGGTAGGCGTGTACCGGCTTACGATGGACGGAAGAGTCTTGTTACTGCAGGTCCATTGCCCTTTTCCTCGAAGGACTTTGTGGTCAGGTTGGTTGACGATGACGACCGAGGCTCGTCTTCTGGTTCTGCTAGAACAAAACGTGAGCGCGAGTTCAAGGTCACTATACGGTTCGCTGCAAGGGCTGACCTTCACCATCTTCAGCAGTTTCTCAGGAGCCAACAGCTGGACAGTCCACAGGAAACCATACAAGCACTTGATATTGTTTTGCGGGCAACACCATCTGAGAAGTATAATGTTGTGGGAAGGTCATTTTTTTCTCCCACTTTGGGGTTAACAGGTACACTGGGTAGTGGGACAGAATATTGGAGAGGATATTATCAAAGCCTTCGCCCAACCCAGATGGGACTTTCCCTCAACATTGATGTTTCAGCGAGAGCTTTTTATGAACCAGTTCTTGTTACTGAATTTATTGCGAAACATTTTAGATTAAATTTTTCAAGGCCTCTGTCTGATCAAGACCGTGTTAAGGTTAAGAAAGCTCTGAGAGGTATAAAGGTGATACTTAGTCATGGCAAGTATATTAGAAGTTATAAAATTACTGGAGTTTCCAAAGAACCTCTCCAGGCGTTAATGTTTACACTTGATGACAAAAGAACAAAAGTTTCGGTTGTTCAATATTTCCGTGAGAAATACAATATTGTGTTAGAGTGTTTGGCTCTTCCTGCTCTCCAAGCTGGAAGTGACACAAAACCTATTTATTTGCCTATGGAGCTTTGTCAGATCACAGCTGGACAGAGATACACTAAAAGATTGAATGAAGAACAAGTGACTAATCTTCTAAGGGCTACCTGTCAGCGTCCTCATGAAAGGGAAAACTACATTAAACAGATTGTGAGGGAGCACAATTTCAACACAGACAAGTTTGTGCGTGAGTTTGGGATTAATGTAAGGGAGGATCTTGCGTTGGTTGATGCCCGTGTTTTGCCTACCCCAACGCTTAAATATCATGAATCAGGCAAAGAATCTAAAGTTGACCCAAGGATGGGTCAGTGGAATATGATTGACAAGAAAATGATTGATGGTGGCAAGGTGCAATATTGGACTTGCCTAAACTTTTCAGCGAAAGTAAACAGAGAAAGAGACTGGGCAGCTAGATTTTGTAGTGAATTGGTCTATATGTGTACAAGCAAGGGAATGCTATTCAATCGAGACCCTTTGATTCCCATAACTTCAGGTTACCCTAATCAAATAGAGACAGCACTCATGAACGTCCATAAGCAGAGCATGTCAAAACTTGCAAACTTGAAGCAGGGGGGGCCAATTCAGTTGTTAATTATAATTCTGCCTGATGTCAAGGGCTCTTATGGAAAAATAAAGAGAATATGTGAAACAGAACTGGGGATAGTATCTCAATGTTGTCAACCCAGGCAAGTTTTAAAGTTGAATAAGCAGTATCTTGAAAATGTGGCCCTGAAGATTAATGTTAAGGTTGGTGGTCGTAATACTGTGTTAAATGATGCAATTGAAAGAAGAATCCCCCATGTGACTGATGAACCAACGATAATATTTGGTGCGGATGTTACACATCCACAGCCAGGGGAAGACTCAAGTCCTTCTATAGCTGCAGTAGTGGCTTCCATGGATTGGCCTTGGGTTACAAAGTATAGGGGAATTGTTTCTGCCCAGCATCACCGCCAAGAAATTATTCAGGATCTTTATAAAATACATGAAGATTCTAAGAAGGGTATTGTACATGCTGGAATTGTCAGGGAGTTAATCCGATCCTTCTATAAATCAACTGGGCATAAACCTCGAAGAATTATATTCTACAGAGATGGAGTGAGTGAGGGACAATTTAGTCAGGTTTTGCTTTATGAGATGGATGCAATCAGAAAGGCTTGTGCCTCGTTAGAGGATGAATATCTACCTCCAGTTACATTTGTGGTGGTACAGAAAAGACATCACACCCGTCTCTTCCCTGTTGATCGTAATCAGATGGATAGAAGTGGAAATATAATGCCAGGGACTGTTGTTGACACATCCATCTGCCACCCTCGGGAATTTGACTTTTATCTCAATAGCCATGCTGGAATTCAAGGAACTAGTCGACCAACTCATTATCATGTATTGTATGATGAAAACCACTTCACTGCGGATGAGTTGCAGATTTTGACAAATAATTTATGTTATACGTACGCAAGGTGTACTCGGTCGGTTTCAATAGTTCCTCCTGCATACTATGCACACTTGGCTGCTTTCCGAGCTCGATACTACATTGAAGGTGAAACTTCGGAAGCTGGTTCTGCGAGTGGAAGTGGAAGCAGGAATACCAACGTCGATGTGACACTGCCCTCAATCAAGGAAAATGTCAAAGAAGTTATGTTTTACTGCTGA 2946 0.446 MSRRGGGRQSQSRYDQPSPAQSAGRGRGRGRGHAPPPPSSVPIPSPAIGYSSAAAPVAASSSSSVPLPSPAIDSSSAAAPVVASSSSSPLPSPVPVETLTSEVEQKLTLQPPAPSSAKAIRFPDRPGYGKAGRKIQVRANHFQLQVAQCDLHHYDVSITPEIPSKKVSRDVLGQLIRMYQESHLGRRVPAYDGRKSLVTAGPLPFSSKDFVVRLVDDDDRGSSSGSARTKREREFKVTIRFAARADLHHLQQFLRSQQLDSPQETIQALDIVLRATPSEKYNVVGRSFFSPTLGLTGTLGSGTEYWRGYYQSLRPTQMGLSLNIDVSARAFYEPVLVTEFIAKHFRLNFSRPLSDQDRVKVKKALRGIKVILSHGKYIRSYKITGVSKEPLQALMFTLDDKRTKVSVVQYFREKYNIVLECLALPALQAGSDTKPIYLPMELCQITAGQRYTKRLNEEQVTNLLRATCQRPHERENYIKQIVREHNFNTDKFVREFGINVREDLALVDARVLPTPTLKYHESGKESKVDPRMGQWNMIDKKMIDGGKVQYWTCLNFSAKVNRERDWAARFCSELVYMCTSKGMLFNRDPLIPITSGYPNQIETALMNVHKQSMSKLANLKQGGPIQLLIIILPDVKGSYGKIKRICETELGIVSQCCQPRQVLKLNKQYLENVALKINVKVGGRNTVLNDAIERRIPHVTDEPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPWVTKYRGIVSAQHHRQEIIQDLYKIHEDSKKGIVHAGIVRELIRSFYKSTGHKPRRIIFYRDGVSEGQFSQVLLYEMDAIRKACASLEDEYLPPVTFVVVQKRHHTRLFPVDRNQMDRSGNIMPGTVVDTSICHPREFDFYLNSHAGIQGTSRPTHYHVLYDENHFTADELQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSEAGSASGSGSRNTNVDVTLPSIKENVKEVMFYC 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi597g00014 981 MobiDBLite consensus disorder prediction 1 74 - -
Sebi597g00014 981 ProSiteProfiles Piwi domain profile. 627 944 IPR003165 GO:0003676
Sebi597g00014 981 FunFam protein argonaute 10-like 695 981 - -
Sebi597g00014 981 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 114 945 - -
Sebi597g00014 981 SMART Piwi_a_2 627 944 IPR003165 GO:0003676
Sebi597g00014 981 Pfam N-terminal domain of argonaute 133 273 IPR032474 -
Sebi597g00014 981 FunFam Argonaute 10 511 689 - -
Sebi597g00014 981 SUPERFAMILY Ribonuclease H-like 616 944 IPR012337 -
Sebi597g00014 981 Pfam Piwi domain 628 943 IPR003165 GO:0003676
Sebi597g00014 981 CDD PAZ_argonaute_like 337 445 - -
Sebi597g00014 981 Gene3D paz domain 329 451 - -
Sebi597g00014 981 MobiDBLite consensus disorder prediction 1 19 - -
Sebi597g00014 981 ProSiteProfiles PAZ domain profile. 335 447 IPR003100 GO:0005515
Sebi597g00014 981 Pfam PAZ domain 360 464 IPR003100 GO:0005515
Sebi597g00014 981 CDD Piwi_ago-like 491 943 IPR045246 -
Sebi597g00014 981 Gene3D - 695 981 IPR036397 GO:0003676
Sebi597g00014 981 MobiDBLite consensus disorder prediction 55 71 - -
Sebi597g00014 981 Pfam Argonaute linker 2 domain 473 519 IPR032472 -
Sebi597g00014 981 SMART PAZ_2_a_3 335 466 IPR003100 GO:0005515
Sebi597g00014 981 Gene3D - 511 690 - -
Sebi597g00014 981 SUPERFAMILY PAZ domain 330 487 IPR036085 GO:0005515
Sebi597g00014 981 SMART DUF1785_2 282 334 IPR014811 -
Sebi597g00014 981 Pfam Mid domain of argonaute 530 610 IPR032473 -
Sebi597g00014 981 Pfam Argonaute linker 1 domain 284 333 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi597g00014 Sebi-Chr597 565266 570793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi597g00014 77 981 Eukaryotic Initiation Factors Gene Family AT1G48410 58.511 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi597g00014 K11593 - gmx:100799033 1313.13