Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi596g00036 ATGAACACAAAGTGCATGAAAAGGAGCGGCGGTGCTCCGGCGGTGTTCAAATCCCCAAAATGCCCCCGCTGGAAGCTCTCCGATTACGATTCTCCCCCCGAAACCACCGCGCGTTGCCAGTCCGCCGTGCTCCAGGGCCGCAGAAACTCTCAAGAGGATCGCACTCTTTGCGTCCTCGATCTTCGCATTCCCTTCCCCAGTGCGGTCGGGATCAAGGAGGCTGTGGTTGGGATTATGGCTGTTTTCGATGGTCATAACGGCGCAGAAGCTAGTGAGATGGCATCGAAACTTTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTCCTTGATGCCACGTATTCTGTTGTATCCAAGACGTCGACAGGAACATTGCTTAACAAGAGAGATCCTGACCACGTAAATATATTGCGTAGAGGGAAAGAGATTCTAGGTTGGCAATGGCATGAACTGCATCCTGAAAGGTTTCAGAATATATTTTCTGCAAATATTGATGATACTTTTCACTTGGAAATTTTGAAAGAAGCTTTGTTGAGAGCGATCCATGATATTGATGCAAAATTTTCTGAGGAAGCCTTTAGAAATAGTCTTCATTCAGGATCTACGGCAGCCGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGTCTTCTTGTGCTCAGAAAATTTTCAGTCTCCTAGAGAGGCTAAAGCCTCATTGTTAAAGCTATACAGGCAGAAAGAGTATGAAGGTTCTGTTTCCGTGTGGGATCGTGAAAAGTACAGATTGGCTTCTTCCCACGGACTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCTGACAGAGACGATGAAAGAATTCGAGTGGAATCATCTGGTGGTCAAGTTCTAAATTGGGGTGGTTTACCTCGTGTAAATGGTCAGCTGGCTATTACACGGGCTATTGGTGACGTGTTCTTTAAAAGTTATGGTGTTATATCTACACCAGAAGTGACTGATTGGCAACCTCTGACTGCTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTATTTGAGAAGACGAGTGTGCAGGATGTCTGTGATTTGTTGTGGGAAATACACCGTTACAGTAGCATGAGATCGGAGTGTACCCCTTCATCTTCCTACTCATTGGCAGATTTTATTGTTAATACTGCCTTCAAAAAGGGCAGTGTGGACAATATGGCAGCAGTTGTCGTTCCTCTAGAATCTGCCAAATCTACTGCAAAGCAGCCAAACAGTTTGAGAGTTGTAGGTGAAGAATGCAACAAGATGCATGTGTTGGCGAGCAAGCTACCTTGA 1332 0.4482 MNTKCMKRSGGAPAVFKSPKCPRWKLSDYDSPPETTARCQSAVLQGRRNSQEDRTLCVLDLRIPFPSAVGIKEAVVGIMAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDATYSVVSKTSTGTLLNKRDPDHVNILRRGKEILGWQWHELHPERFQNIFSANIDDTFHLEILKEALLRAIHDIDAKFSEEAFRNSLHSGSTAAVVLVADDKILVANIGDSKVFLCSENFQSPREAKASLLKLYRQKEYEGSVSVWDREKYRLASSHGLTHFAVKELTSDHHPDRDDERIRVESSGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVISTPEVTDWQPLTANDSYLVAASDGVFEKTSVQDVCDLLWEIHRYSSMRSECTPSSSYSLADFIVNTAFKKGSVDNMAAVVVPLESAKSTAKQPNSLRVVGEECNKMHVLASKLP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi596g00036 443 ProSiteProfiles PPM-type phosphatase domain profile. 38 412 IPR001932 -
Sebi596g00036 443 SUPERFAMILY PP2C-like 37 413 IPR036457 -
Sebi596g00036 443 Pfam Protein phosphatase 2C 172 405 IPR001932 -
Sebi596g00036 443 Gene3D - 34 421 IPR036457 -
Sebi596g00036 443 SMART PP2C_4 30 410 IPR001932 -
Sebi596g00036 443 CDD PP2Cc 38 412 IPR001932 -
Sebi596g00036 443 PANTHER PROTEIN PHOSPHATASE 33 411 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi596g00036 Sebi-Chr596 676071 679849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi596g00036 93 435 PP2C-type Phosphatase Gene Family AT3G63320 52.478 7.99e-116 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi596g00036 - - gmx:100781476 725.317