Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi596g00025 ATGAATCACCTACCATCAAACCTCTTGCCTAATGAAGCAAGCCCCAAGTGGATGAACAAAGGGGACAACACGTGGCAGCTTACAACAGCTACTCTGGTGGGTCTGCAAAGTGTTCCGGGTCTTGTCATTCTCTACGGCAGCATAGTGAAGAAGAAATGGGCGTTGAACTCCGCATTCATGGCCCTCTATGCATTTGCAGCGGTTTTGGTTTGTTGGGTAGGTTGGTGCTATGAAATGTCATTTGGGGATAGGATCTTTCCATTCCTAGGACGTCCAAACGTGGCCTTATTGGACCAGAAATTCCTTCTGCGCCAAGCTTTTGCTGGGAACATTCCCAACGCCACCATGGTCTACTTCCAATTGGTTTTTGCTGCCATCACTTTGATTCTCATAGCTGGGGCTTTACTCGGGAGAATGAACTTTTATGCGTGGATGTTGTTTGTTCCACTCTGGGTCACTTTCTCCTACACCATATGTGCATTCAGTATATGGAGTACTAATGGTTGGTTATTCAAAATGGGCCTCATTGATTATTCTGGTGGCTTTGTTATTCACCTTTCTTCTGGTGTTGCTGGTTTCACCGCAGCATGCTGGGTGGGACCAAGGGCAATCAAGGATAGAGAGAGGTTTCCTCCAAACAACATACTTCTGATGTTGGCAGGGGCTGGGCTACTGTGGATGGGATGGACTGGATTCAACGGTGGAGATCCTTACACAGTCAGCATAGATGCATCTCTAGCAGTCCTTAACACCCACGTGTGCACGGCCATGAGCTTGCTGACTTGGCTTCTCCTTGACATCCTCTTCTTTGGAAAGCCTTCTGTCATTGGTGCCACTCAGGGCATGATCACTGGCTTGGTTTGCATCACCCCTGCTGCAGGTGTGGTGCAAGGTTGGGCAGCAATCTTAATGGGAATGATGTCTGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAATTAGGGTCCTCAAACAGGTGGATGATACTATGGCAATTTTCCACACCCATGCTGTGGCTGGTTGCTTAGGTGGCATTCTAGCTGGCTTCTTTGCTGACCCTAAGCTTTGCCGTCTCTTCTATCAGGTGCCAGATTGGCAGCACTACACAGGCCTTGCTTATGGCATCATGGGAGGGAGGGCTAAAGCAGGGTTCAAGCAAATGGGGGTTCAGCTACTTGGCATTGTGTTTGTGATACTGCTCAATGTTACCATAACTAGCATTGTATGTTTGTTGGTTAGGATGATAGTTCCACTGAGGTTGTCTGAAGATGAATTGCAAATTGGGGATGATGCTGTACATGGTGAGGTTGCCTATGCATTGTGGGGCGATGGACAGAAACTTGAGACTGTGAATGAAATTTTGGCTTTCGAGAGGAATCATGAATGGCCAAATGTGGAACTAAAAACTTCGAGTGAAGTTCAATTGGAATGA 1440 0.4729 MNHLPSNLLPNEASPKWMNKGDNTWQLTTATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYEMSFGDRIFPFLGRPNVALLDQKFLLRQAFAGNIPNATMVYFQLVFAAITLILIAGALLGRMNFYAWMLFVPLWVTFSYTICAFSIWSTNGWLFKMGLIDYSGGFVIHLSSGVAGFTAACWVGPRAIKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVSIDASLAVLNTHVCTAMSLLTWLLLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAILMGMMSGSIPWYTMMVLHKEIRVLKQVDDTMAIFHTHAVAGCLGGILAGFFADPKLCRLFYQVPDWQHYTGLAYGIMGGRAKAGFKQMGVQLLGIVFVILLNVTITSIVCLLVRMIVPLRLSEDELQIGDDAVHGEVAYALWGDGQKLETVNEILAFERNHEWPNVELKTSSEVQLE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi596g00025 479 PANTHER AMMONIUM TRANSPORTER MEP2 6 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi596g00025 479 Gene3D Ammonium transporter AmtB like domains 7 444 IPR029020 -
Sebi596g00025 479 NCBIfam ammonium transporter 22 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sebi596g00025 479 FunFam Ammonium transporter 7 444 - -
Sebi596g00025 479 SUPERFAMILY Ammonium transporter 17 423 - -
Sebi596g00025 479 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Sebi596g00025 479 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Sebi596g00025 479 PRINTS Rhesus blood group protein signature 120 136 IPR002229 GO:0005886
Sebi596g00025 479 Pfam Ammonium Transporter Family 25 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi596g00025 Sebi-Chr596 475030 476951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi596g00025 114 464 Inorganic Solute Cotransporters AT2G38290 59.544 1.10e-142 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi596g00025 K03320 - gmx:112999382 824.313