LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi595g00054	ATGGTATCATCACATAGGCAATCTCGCGAGGAGCATGGGGGTGATGACAGACGTCATAGAATCCCAATTCAGGAATCTAAACAGAAACACAGTGATCCAAAACAAGCAGCTTTTAGTGGCCTTGGAAATGTGCTAAAAGGGTTGTGGAGCAATGACCTTGAATTATACTTTGAACGTTTCCTGCGAAGAGTGGTGCGGGAAGAGGTGGAACGCAAAATCCCAGATTACCTATGTACAAGAGCAACGGCTAATCAGGCTGGCATATCTAGAACCACACATTTTCAGTTGCGTTTCATTAGTAAATTGGCTGATACAATTTTCACACACACTGACATCATAGCAGAGGATAACACACCCATTCAAATTGCTCTCTTTGATGTTAGATCTCAGTCAATTGTTAATGTTGGCCCCCTCTCATGTATAAAGATAGAGATCTGTCCCCTCAATGGTGAGTTCAGCTTTAATGACAATGAGGATTGGACTGAAGATGATTTCAATGCCAATATCTTGCGTGAGAGGGATGGTAAAAGGCCATTACTGAATGGAGATAGGTTTATTGCTCTGAAAAATGGAGTAGGTTGTATCAATAAACTTGTGTTCACAGATAACTCAAGATGGATAAGAAGCAGAAAGTTTAGGTTGGGAGCCAAAGTTGTGCAACCAATTTCAAGTGAAACAAGCATTAAGGAAGGTAGAAGTGAACCTTTTGTTGTCAAAGATTATAGAGGAGAGTCTTACAAGAAACACTATCCTCCTTCCTTGAATGATGATGTTTGGCGTTTGGAGCAAATTGCCAAAGATGGAAAAATCCACAAGCGGTTGTCTTTCCATGGAATTCACACTGTCCAGGATCTGTTGCGGTTATACACAACAAATCAATCTTTATTATATGAGAAGGTTGGCAACATTCCGAAGAGGTCATGGCTAGCAATTATTGAACATGCCAAGACTTGTGTGATTGATGATGACAAGCCTTATGTCTACCGAACAGCAGAACAACCAATAGGTCTGCTTTTCAATTCCATCTATGTCCTTGTAGGAGTGACATTTGATGGGCAAAATTATTGTTCTCCTGATATTCTCACCCCCAATGAAAAGCATTTGGTGGAAATAGTGAAGCAACATGCTTATAAAAATGTGAATCATTTGAAGCCAATTGATGATACATCATTGAGCTGCTTAAGACCATTGGCATGTCTAGGAGCAGGGCAGTCCAGTGCTACAGATCAAGGTCTTCAACAATTTAATATCTCTACAGTAAATGAAGGTCATCAAGAAACATGGTCAGGTTATGATCAACCATTCACCTCAACTTCATATGTTGATGAAGAAGTACATAATTACCAAACCTATGCTGATCCACTACCAGACATAAGAGAAATCCCAATAAACAGTTCAATAAATGGTCAATTTTTCTGTGGATTGGGTAGTGAAGGGGATAGTTGGCCCCCTCATGGATCACATTTGTCAGTAACACTAAGTGGTCATTCAACAGAAGATGACAGTTCACAGATTCAATTCACAAATTGTTGTTCTCCTTCTACAACATGGGGGCAAGAAAATGACTTGTACTTTGCTTCTTCTGGTGGAGCAGACTTTTGTCATTCTCATTTCTTCAATTCTACTGAGAGCATATCAAGCAGTGGAAAATCCAAAGCACTATGGTATAAGATCCGGAGTGCTCTAAAATGTGCAATATTAATCGGAAGGGATGCAATTGCCAGAAGGAATGCCAAGCTGTTAAAGTATAACTATTAG	1758	0.3982	MVSSHRQSREEHGGDDRRHRIPIQESKQKHSDPKQAAFSGLGNVLKGLWSNDLELYFERFLRRVVREEVERKIPDYLCTRATANQAGISRTTHFQLRFISKLADTIFTHTDIIAEDNTPIQIALFDVRSQSIVNVGPLSCIKIEICPLNGEFSFNDNEDWTEDDFNANILRERDGKRPLLNGDRFIALKNGVGCINKLVFTDNSRWIRSRKFRLGAKVVQPISSETSIKEGRSEPFVVKDYRGESYKKHYPPSLNDDVWRLEQIAKDGKIHKRLSFHGIHTVQDLLRLYTTNQSLLYEKVGNIPKRSWLAIIEHAKTCVIDDDKPYVYRTAEQPIGLLFNSIYVLVGVTFDGQNYCSPDILTPNEKHLVEIVKQHAYKNVNHLKPIDDTSLSCLRPLACLGAGQSSATDQGLQQFNISTVNEGHQETWSGYDQPFTSTSYVDEEVHNYQTYADPLPDIREIPINSSINGQFFCGLGSEGDSWPPHGSHLSVTLSGHSTEDDSSQIQFTNCCSPSTTWGQENDLYFASSGGADFCHSHFFNSTESISSSGKSKALWYKIRSALKCAILIGRDAIARRNAKLLKYNY	585

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi595g00054	585	PANTHER	OS02G0177800 PROTEIN	30	496	IPR012416	GO:0005516
	Sebi595g00054	585	Pfam	Calmodulin binding protein-like N-terminal domain	94	240	IPR046831	-
	Sebi595g00054	585	Pfam	Calmodulin binding protein central domain	253	318	IPR046830	-
	Sebi595g00054	585	Pfam	Calmodulin binding protein C-terminal domain	326	385	IPR046829	-
	Sebi595g00054	585	MobiDBLite	consensus disorder prediction	1	35	-	-
	Sebi595g00054	585	MobiDBLite	consensus disorder prediction	1	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi595g00054	Sebi-Chr595	597612	600308	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi595g00054	57	576	Calmodulin-binding Proteins	AT4G25800	33.096	1.03e-88	285

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi595g00054	-		-	gmx:100806598	697.967