Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00048 ATGGCGACAGAGCCAATCTTGCCATTATCTGTTGTATCTGTGATTGAAGATGTTCTTCAAAGACATGGAAGCCGATTAAGCGACATTGACTTGGCATCAAGGAAGGCTGAAGAAGCTTCCTCAAGAAGGAATGAAGCAGCTGGGTGGCTGCGAACGACAGTTGGAGTGGTTGGAGGGAAAGACATGTCAGCTGAGCCTTCTGAAGAAGATTTCAGGATTGCATTGCGTAGTGGCATTATACTTTGCAATGCTCTTAACAAAATTCAACCTGGAGCCATTCCCAAGGTAGTTGAAGCCCCTGGTGATAATATTATTATTCCGGATGGGGCAGCACTATCTGCTTATCAATACTTTGAAAATGTAAGGAATTTTCTAGTGGCTGTGGAGGAAATGGGGCTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGGAAATCTTCAAGGATAGTGAATTGTGTTCTAGCTCTCAAGTCGTATAGTGAATGGAAACTGGGAGGCAAAAATGGGTCATGGAAATATGGTGGGAATCCAAGGCCACCTACGCCTGGGAAACAAGTTGTGAGGAAAAACTCAGAACCATTCATGAGGTCTTTGTCAAGAGGCATGTCATCAGGTGATAAAGATGGTTGGCCGAGTGATGTCTCTTCAAACACTGAAGTGGAGCATGAACGCATTGAAGGGGGTTCTATTCCTTCCTTGAATTCACTAATTCGTGACATTTTGTCAAATAGGAAGCAAGAAGAAATTCCCATTTTACTTGAGTCTCTGCTTAGCAAAGTCATGGAGGAGTTTGAACATCGCATGCTAATACAACAAGAAACGTTTAAAACAACTCAAGAAGATAAGACACCATCTGAATCAGAGAATTCAAATTTAAAAGCGGCTAGTGATGATGAAGAGATGGAAGAAAATGAAGATGTTGAGATTAAACAAAAGGAATTTCATGATGTGAAGTACAATGATGATGAAGAATCGAGGAGCGAGCTTTTGAAGCAACAAAGATTAGTTCGACAACAAAAAGAAAAACGTCCAGGAGTGCAGTTCTTGCAAAAGAAATATGAGGAGGATTTCATCTATCTAAGTAAGCACCTGCATAGCCTAGCTTCAGCTGCTACAGGATATCAGAAGATTCTTGAAGAAAACCGCAAGGTGTACTGCAGAGTTAGACCCTTAATAGGTGGGCATCCAAACCATCATAGCCCTGTCAGTAACATAGAGGAAGACAGTATCTCACTCATAACATCTTCCAAAAATGGGAAAGAGGTGAGGAAGACATTTAGTTTCAACAGAGTGTTTGGTCCTTCTGCAACACAAGATACTCAACCCCTAATTCGTTCAGTTCTAGATGGCTACAATGTATGTATATTTGCCTATGGTCAAACAGGATCAGGAAAAACACACACTATGTCTGGACCAAACAATCTTACTGAGGAAACAGTAGGGGTCAACTATCGTGCACTGAGAGATCTTTTCCTTATATCAGAACAGAGGAAAGACACCATTCACTATGATATCTCTGTTCAGATGCTTGAGATTTACAATGAGCAATTAGTGCTACTTGCCATGAATGATAGGAGTAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTACATCAGGAAATAGTCTCCGTGGCTGTATCCACTTAGTTGATCTGGCAGGAAGTGAGAGGGTCGATAAATCTGAGGTCACAGGGGATCGGAATAGTAAACTTACTCAGCTGCTTCAGGATTCTCTTGGAGGCCAAGCAAAGACTCTCATGTTTGTTCATGTTAGCCCAGAGCCTGAAGCTCTTGGAGAAACAATTAGTACACTAAAGTTCGCTGAAAGGGTTTCCACTATTGAACTTGGAGCTGCACGAGTTAACAGAGATAGTGCAGATGTTAAAGAGCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGTGAGGAAAGATGGAGAATTGGAGCACTTTAAACAGTCTGTACATAGCACTGAATTGTCAAAGTTGAAATCCCATTCGTCTTCCCCTACTCTAGGTAGTGGGACTACTGGAGGTCGTAAGCTACCAAGAGATGATTCTAATAGCATAGAGGACCAGAAAGATGATGCATCCAAGTTGAAACGACGAAGCCTTGATCCCCAAGATGTGTATATGAATCCACCTATGTGGCCACATGCTGGGGTAAATGGAAAGGAGGATGATAAGGAATCAACTTCTGGGGATTGGGTTGATAAAGGTATGAATAGGAATGACAGCTTACCAGTTGATGATAGCCTTGTGGGGCAGTGGGAAGTAGAAAGCAAACGATCATCTTCGCCATTATTAAGTCCCACTTATCTTTCAGACCCTTCAAAAATATGCATGGAGATGAGCAGTACAAATGATTCTGATGAGCTTGAGCTAACGACTAGTGAATGTTCAGAATCAGACATGAGTTGGCAGTCACATATATCATCTACTAAAGCAACCACTCTTTCCAATGGATTAGTGTCTAAAGCAAAGAAATCAACTAATCGCAGACAAGCAAAGAACCAAGAAACCAGGAGTATGATCCCATCACTGCTTCCTTCACCATCAAGGAAACAACCCACCATAGTTAGTCAATCAAGAAAGCATCCAGTTCCATTGATGCTAAGAGAAGAACCGGAAATTCCAAGTGAGAAGTTGCTCAAGTGA 2679 0.4196 MATEPILPLSVVSVIEDVLQRHGSRLSDIDLASRKAEEASSRRNEAAGWLRTTVGVVGGKDMSAEPSEEDFRIALRSGIILCNALNKIQPGAIPKVVEAPGDNIIIPDGAALSAYQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKLGGKNGSWKYGGNPRPPTPGKQVVRKNSEPFMRSLSRGMSSGDKDGWPSDVSSNTEVEHERIEGGSIPSLNSLIRDILSNRKQEEIPILLESLLSKVMEEFEHRMLIQQETFKTTQEDKTPSESENSNLKAASDDEEMEENEDVEIKQKEFHDVKYNDDEESRSELLKQQRLVRQQKEKRPGVQFLQKKYEEDFIYLSKHLHSLASAATGYQKILEENRKVYCRVRPLIGGHPNHHSPVSNIEEDSISLITSSKNGKEVRKTFSFNRVFGPSATQDTQPLIRSVLDGYNVCIFAYGQTGSGKTHTMSGPNNLTEETVGVNYRALRDLFLISEQRKDTIHYDISVQMLEIYNEQLVLLAMNDRSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVTGDRNSKLTQLLQDSLGGQAKTLMFVHVSPEPEALGETISTLKFAERVSTIELGAARVNRDSADVKELKEQIASLKAALVRKDGELEHFKQSVHSTELSKLKSHSSSPTLGSGTTGGRKLPRDDSNSIEDQKDDASKLKRRSLDPQDVYMNPPMWPHAGVNGKEDDKESTSGDWVDKGMNRNDSLPVDDSLVGQWEVESKRSSSPLLSPTYLSDPSKICMEMSSTNDSDELELTTSECSESDMSWQSHISSTKATTLSNGLVSKAKKSTNRRQAKNQETRSMIPSLLPSPSRKQPTIVSQSRKHPVPLMLREEPEIPSEKLLK 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00048 892 MobiDBLite consensus disorder prediction 875 892 - -
Sebi595g00048 892 Coils Coil 627 654 - -
Sebi595g00048 892 PRINTS Kinesin heavy chain signature 570 591 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 PRINTS Kinesin heavy chain signature 451 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 Gene3D Kinesin motor domain 259 521 IPR036961 -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 691 713 - -
Sebi595g00048 892 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Sebi595g00048 892 Pfam Kinesin motor domain 522 571 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 Pfam Kinesin motor domain 388 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 Pfam Kinesin motor domain 573 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 MobiDBLite consensus disorder prediction 663 756 - -
Sebi595g00048 892 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Sebi595g00048 892 SMART kinesin_4 380 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 SUPERFAMILY Calponin-homology domain, CH-domain 34 185 IPR036872 -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 308 326 - -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 667 683 - -
Sebi595g00048 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 656 IPR027417 -
Sebi595g00048 892 ProSiteProfiles Kinesin motor domain profile. 573 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 Gene3D - 32 162 IPR036872 -
Sebi595g00048 892 SMART ch_5 42 160 IPR001715 GO:0005515
Sebi595g00048 892 MobiDBLite consensus disorder prediction 729 743 - -
Sebi595g00048 892 Gene3D Kinesin motor domain 522 661 IPR036961 -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 768 892 - -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 276 326 - -
Sebi595g00048 892 MobiDBLite consensus disorder prediction 280 298 - -
Sebi595g00048 892 CDD CH_AtKIN14-like 42 159 - -
Sebi595g00048 892 ProSiteProfiles Kinesin motor domain profile. 382 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi595g00048 892 MobiDBLite consensus disorder prediction 844 870 - -
Sebi595g00048 892 PANTHER KINESIN-LIKE PROTEIN KLP-3 522 573 IPR027640 GO:0003777|GO:0007018
Sebi595g00048 892 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Sebi595g00048 892 MobiDBLite consensus disorder prediction 768 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00048 Sebi-Chr595 513680 519631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00048 384 620 Calmodulin-binding Proteins AT5G65930 33.129 1.08e-35 144