Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00029 ATGGTCACCACAACACTTCATGCTTCTACTGCCTCAGATTCTGGCTCTGTAGTTCCTTCTTCATACCAACAAGCCTTCCATCCATTCCATTTCCTCAGATTTTGTACTACACATTCATTAAGACTAGAGACACAAGCAGGTCCAGTGGTGGGAATTATATTGCAGAGTTTGATGGGGCATTTTTCATCTATGTTCAATGGGTTGGCAAAATCATTTGCAATGAAGAAAGGGAAGAATTCTGGTAGATGTAGCGGGAGAGAAGCTGCGGAAGCAATGGCAAAGGAAGCTAAAAAGAATCACTCCATGCTGCATAGCTCAGGCACTGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAGTGAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGATGCCAAGAGGACATGATCTTCTGTGGGATTTTTGATGGACATGGACCATGGGGTCACTTTGTGGCCAGAAGAGTAAGAGAATCATTGCCACCCTCTTTGCTATGCAACTGGCAAGAGACTCTTTCCCAAAATTCACTTGATCCTGATATTGATATAGAGACAGAGAAAAAACATCACCGGTTTAATATATGGAAGCATTCCTACTTGAAGACTTGTGCTGTCATTGATCAAGAACTACAACAGAATCGCAAGATAGATTCATTTTTCAGTGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTGATTGCAAATGTTGGTGACTCTCGTGCTGTTTTAGCTACAACATCAGATGATGGAAATTTGGTATCAGTTCAGCTGACAGTAGATTTCAAGCCCAATTTACCACAGGAGGCAGAGCGAATACTTGAGTGTCAAGGGAGGGTGTTCTGCTTACACGATGAGCCAGGAGTGCACAGGGTTTGGTTGCCAGATGAGGAGTCCCCAGGATTGGCCATGTCTAGAGCTTTTGGTGACTACTGTGTGAAAGAGTATGGTCTTATTTCAGTGCCTGAGGTAACACAAAGGAATATAACCAACAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTAATCTCGAATCAAGAAGCGGTGGATATTGTGTCTTCATCTTCAACAGCAGACAGAACAAATTCAGCTAAACGTTTGGTGGAGTGTGCAATGCATGCATGGAAACGCAAGAGGCGGGGTATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCTTCACCTGAGCAAGTTGTTGCTACCCTAAAATAG 1275 0.4329 MVTTTLHASTASDSGSVVPSSYQQAFHPFHFLRFCTTHSLRLETQAGPVVGIILQSLMGHFSSMFNGLAKSFAMKKGKNSGRCSGREAAEAMAKEAKKNHSMLHSSGTVNVDGSNNFASVFSKRGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVARRVRESLPPSLLCNWQETLSQNSLDPDIDIETEKKHHRFNIWKHSYLKTCAVIDQELQQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGNLVSVQLTVDFKPNLPQEAERILECQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCVKEYGLISVPEVTQRNITNRDQFVVLATDGVWDVISNQEAVDIVSSSSTADRTNSAKRLVECAMHAWKRKRRGIAMDDISAICLFFHSSSPEQVVATLK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00029 424 FunFam Probable protein phosphatase 2C 34 108 413 - -
Sebi595g00029 424 Pfam Protein phosphatase 2C 141 389 IPR001932 -
Sebi595g00029 424 ProSiteProfiles PPM-type phosphatase domain profile. 117 411 IPR001932 -
Sebi595g00029 424 Gene3D - 103 414 IPR036457 -
Sebi595g00029 424 CDD PP2Cc 116 411 IPR001932 -
Sebi595g00029 424 SUPERFAMILY PP2C-like 116 412 IPR036457 -
Sebi595g00029 424 SMART PP2C_4 108 409 IPR001932 -
Sebi595g00029 424 PANTHER PROTEIN PHOSPHATASE 97 409 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00029 Sebi-Chr595 313663 317907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00029 58 412 PP2C-type Phosphatase Gene Family AT3G05640 71.709 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi595g00029 - - gmx:100793051 641.343