Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00028 ATGTCATCTGAGCCGCTGATTCAACCGCCGGACACAGTACCGGCGTTCCGGCAATGGGGAGAACCGGCGCGGATTTTCGAGGAGTTGCCCAAAGCCACCATCGTGTCCGTGTCACGACCAGAAACTGGAGACATAAGCCCAATTCTCCTTTCTTATACCATTGAGTTGCAGTACAAACAGGCACATTCTTGTAATAATTACATTTGTGTTTCACAGTTCAAGTGGCGTCTACGGAAGAAAGCATCACAAGTTCTCTATTTACAGTTTGCATTGCGAAAACGTGCATTAATTGAAGATTTACATGACAAGCAAGGGCAGGTAAAAGAGTGGCTTCAAAGCTTAGGAATAGGAGATCAAACGGTGATGGTGCAAGATGATGAAGAACCTGATGATGGAGCTGTACCTATACATCATGAAGACAGTGTTAAAAACAGATATGTCCCATCTGTAGCTGCTCTATCAATAATTCGTCCATCACTAGGAGGTCAACAGTCAGTTGCAGATAGAGCCAAAGTTGCAATGCAGAGTTATTTGGGACTTTTTTTAGGAAACCTGGATATTGTGAATTCTCAAGAGGTCTGCAAGTTTTTGGAGGTCTCCAAGCTATCCTTTTTACAGGAATATGGTCCAAAACTGAGAGAGGGATATGTAACAGTGAAGCATTTGTCAAATATTTCACAGGATTCTGATGTAACATGCTTCCCATGTGATTGGTTTCATTGGTGTAATAACAGCTGGAAGAAGGTATGGGCTGTTTTGAAACCTGGGTTTTTGGCCTTGCTGGATGATCCCATCAACAACAAACTACTGGATATAATTATGTTTGATGTCCTCCCATTCTCAACTGGAAATGAAGGCACCAAAATACATTTAGCTGAACCTATAAAGGAACACAATCCTTTGCGTTACACATTTAAGGTTTCTAGTGGAAATCGGAGCATATGCTTGAGAACTACCAGCAGTGTTAAAGTTAAAGCTTGGGTTACTTCAATTAATGAAGCTGGTCTAAGACCTATGGAGGGTTGGTGTTGTTCTCATCGCTTTGGTTCATTTGCTCCCATAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTATATAGATGGTCAGGCAGCATTTGAAGCAATTGCTTCTTCAATTCAAGATGCAAAGTCAGAGATCTTCATTACAGGATGGTGGCTATGTCCAGAGCTATATCTGAAACGGCCTTTTCATAGTTTTTCTACCTTTAGGTTAGACTCATTACTAGAAGAAAAAGCTAAGCAAGGGGTTCAGATTTATGTGCTTCTCTACAAGGAGGTTTCTTTAGCTTTGAAAATCAACAGCTCATACAGTATGAGAAGACTGCTCAAAATCCATGAAAATGTGAGGGTATTGCGCTATCCTGACCATTTTGCTTCTCGTGTGTATTTATGGTCGCACCACGAAAAGCTTGTAATTATAGACTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGACGATATGACACACCTGAACATAGAGTGGGTGATTGCCCCTCTTTAATATGGCCTGGAAAGGACTATTACAATCCAAGAGAATCGGAACCAAATTCATGGGAAGACACCATGAGGGATGAATTGGATCGCCAGAAATATCCCCGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGCCGTGACATTGCTAGGCACTTTGTTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAACATGAAATTCCACTACTTTTGCCTCACCATCACATGGTCCTCCCACATTACATGGGAAGAAGCAAAGAGATAGACATTGATGGAAAGCAAGATGAAGACGACAGGAAAGAAATTGACAGGCAGGACTCATTTTCCTCACAGTCTCCAGTGCAAGATATACCACTGCTTTTACCTCAAGAAGCTGGTGAACTAGTTACTTCGAGTGGAGATCATACAAATGCCAGTGAAAATTCTCCATTGCTGTCCCAAAATCCAGAACACAAAACTCTAGTTTCAGTTAACCGAAAGAAAGGATTTCAAGATCAAGTTCTTACTTTTAACTTGGGGGCAGAGTCTGTTGTTAATGTTCTAGATGATTGGTGGGAAACACCAGAAGGTACCAATGATGCCACTACTTTGGAATATGGACAAGTTGGTCCACGTACTACTTGTCACTGTCAGGTAATCAGAAGTGTCAGTCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGAAAGCATTCACAATGCATATTGTTCTCTTATTGAAAATGCAAAGCATTTTATTTACATTGAGAACCAATTTTTTATATCAGGTCTAGCAAAGGATGACATAATACAGAACCGTGTTTTGGAAGCGCTATACAGGCGTATTTTGCAAGCCCACAAAGAACAGAAAGATTTTCGAGTTATAATTGTGATGCCCCTCTTGCCTGGCTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCAACTGTGAGAGCCTTAACACATTGGCAGTATAGAACAATTTCTAGAGAAAGGCACTCCATATTACACAATCTTGAAGCTAAACTTGGTCCTAAGATGCATGATTATATTTCTTTCTATGGTCTAAGATCTCATGGAAGACTTTATAAGGATGGTCCTATGGCTACAAGCCAGGTATACGTGCACAGTAAATTGATGATAATTGATGACCGTGTAGCTTTTATTGGATCATCTAATATAAATGACCGGAGTTTGCTTGGATCAAGAGACTCTGAGATTGGAGTGCTTATAGAAGACAAAGAATATGTTGACTCATTGATGAATGGGAAGCCATGGAAGGCTGGGAAATTTTCCCATAGCCTGCGCTGCTCCCTATGGTCTGAGCACCTTGGTCTTCATGCTGGAGAGATCAGTAAAATCAGTGATCCAGTAGCAGATTCAACCTACAAGAACTTATGGTCAGGAACTGCAAAGGAAAATACAAGGATTTACCATGAAGTCTTCGCTTGCATTCCCAATGATCAGATACACTCAAGAGCTGCACTTCGGCAAAGTATGGTTCACTGGAAAGAAAAACTTGGTCATAACACCATAGATTTGGGAATAGCCCCTGATAAATTAGTCTGTCATGAGAATGGAGAAACCAAAGTAATAGACCCGATAGATAGATTGAAGTATGTTAAGGGACATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGAGGAAGATCTAAGACCAGCTGTGATTGAGAGTGAGTTTTATGTATCTCCTCAAGTATATCACTAA 3255 0.4135 MSSEPLIQPPDTVPAFRQWGEPARIFEELPKATIVSVSRPETGDISPILLSYTIELQYKQAHSCNNYICVSQFKWRLRKKASQVLYLQFALRKRALIEDLHDKQGQVKEWLQSLGIGDQTVMVQDDEEPDDGAVPIHHEDSVKNRYVPSVAALSIIRPSLGGQQSVADRAKVAMQSYLGLFLGNLDIVNSQEVCKFLEVSKLSFLQEYGPKLREGYVTVKHLSNISQDSDVTCFPCDWFHWCNNSWKKVWAVLKPGFLALLDDPINNKLLDIIMFDVLPFSTGNEGTKIHLAEPIKEHNPLRYTFKVSSGNRSICLRTTSSVKVKAWVTSINEAGLRPMEGWCCSHRFGSFAPIRGLTEDGSQAQWYIDGQAAFEAIASSIQDAKSEIFITGWWLCPELYLKRPFHSFSTFRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHFASRVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHRVGDCPSLIWPGKDYYNPRESEPNSWEDTMRDELDRQKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRTKAPNEHEIPLLLPHHHMVLPHYMGRSKEIDIDGKQDEDDRKEIDRQDSFSSQSPVQDIPLLLPQEAGELVTSSGDHTNASENSPLLSQNPEHKTLVSVNRKKGFQDQVLTFNLGAESVVNVLDDWWETPEGTNDATTLEYGQVGPRTTCHCQVIRSVSQWSAGTSQPEESIHNAYCSLIENAKHFIYIENQFFISGLAKDDIIQNRVLEALYRRILQAHKEQKDFRVIIVMPLLPGFQGGLDDGGAATVRALTHWQYRTISRERHSILHNLEAKLGPKMHDYISFYGLRSHGRLYKDGPMATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGSRDSEIGVLIEDKEYVDSLMNGKPWKAGKFSHSLRCSLWSEHLGLHAGEISKISDPVADSTYKNLWSGTAKENTRIYHEVFACIPNDQIHSRAALRQSMVHWKEKLGHNTIDLGIAPDKLVCHENGETKVIDPIDRLKYVKGHLVSFPLEFMREEDLRPAVIESEFYVSPQVYH 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00028 1084 FunFam Phospholipase 714 934 - -
Sebi595g00028 1084 SUPERFAMILY PH domain-like 240 337 - -
Sebi595g00028 1084 SMART pld_4 880 907 IPR001736 GO:0003824
Sebi595g00028 1084 SMART pld_4 471 498 IPR001736 GO:0003824
Sebi595g00028 1084 SUPERFAMILY Phospholipase D/nuclease 718 930 - -
Sebi595g00028 1084 Pfam Phospholipase D Active site motif 471 498 IPR001736 GO:0003824
Sebi595g00028 1084 SUPERFAMILY Phospholipase D/nuclease 334 590 - -
Sebi595g00028 1084 Gene3D - 213 334 IPR011993 -
Sebi595g00028 1084 SMART PH_update 211 338 IPR001849 -
Sebi595g00028 1084 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 880 907 IPR001736 GO:0003824
Sebi595g00028 1084 MobiDBLite consensus disorder prediction 647 668 - -
Sebi595g00028 1084 ProSiteProfiles PH domain profile. 210 336 IPR001849 -
Sebi595g00028 1084 Pfam PLD-like domain 753 927 IPR025202 -
Sebi595g00028 1084 CDD PLDc_vPLD1_2_yPLD_like_1 364 509 - -
Sebi595g00028 1084 PIRSF PLD_euk 591 1084 IPR016555 GO:0004630|GO:0006654|GO:0048017
Sebi595g00028 1084 PIRSF PLD_euk 13 605 IPR016555 GO:0004630|GO:0006654|GO:0048017
Sebi595g00028 1084 MobiDBLite consensus disorder prediction 610 668 - -
Sebi595g00028 1084 MobiDBLite consensus disorder prediction 610 624 - -
Sebi595g00028 1084 CDD PH_PLD 188 334 - -
Sebi595g00028 1084 CDD PLDc_vPLD1_2_yPLD_like_2 740 924 - -
Sebi595g00028 1084 Gene3D Endonuclease Chain A 692 943 - -
Sebi595g00028 1084 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 471 498 IPR001736 GO:0003824
Sebi595g00028 1084 Gene3D Endonuclease Chain A 357 591 - -
Sebi595g00028 1084 PANTHER PHOSPHOLIPASE D 170 1068 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00028 Sebi-Chr595 279573 290263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00028 24 1084 Phospholipase D Gene Family (Wang group) AT3G05630 65.213 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi595g00028 K01115 - gmx:100796914 1920.21