Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00018 ATGTCTGGGGGAGATGCACAGAAGGGAAAGAGCATTGCAATCATTGGTGTATCTGCCTTATTACTAGTGGCTATGGTTGTGGCTGTCACAGTTAGTTACAATAAAAACGGTTCAGAAAATGATATAGAGGACAATAGGAAGCACCACGTGGCTTCCACAATCAAAGCAGTCCAAACCCTTTGTCATCCCACCGATTACAAGAAGGAATGTGAGGAAAGCCTCATAGCAGAGGCTGGCAACACCACTGACCCGAAAGAATTGATCAAAATTGCCTTTAACGTTACCATTAAGAAAATTGGTGACAAACTCAAGGAAACAGAGCTATTGCACGAGGTTGAGAAGGAGCCTAGAGCCAAGATGGCACTTGACACGTGTAAGCAACTCATGGATCTTTCAATTGAGGAATTCAAGAGGTCAATTGATGAAATATGTGAGTTTGATCTCACAAATCTTGACAAGATCCTCATGAATTTAAAGGTTTGGCTAAGCGGTGCAGTGACATACCAAGATACATGCTTGGATGGGTTTGAGAACACCACCAGCGAAGCTAGTGCAAAGATGAAGGAACTATTAACAACAGGCATGCACATGAGTAGCAATGCCCTTGCCATTGTTTCAGATTTTGCTGACACTGTCTCAGATTGGAATGTCACTAAGTTATTTGGGCGTCGCCTCCTTCAAGATTCTGAGACTACTCCTTCTTGGGTTGATGAACGAACTCTCCTTGGTACAAACACAAGTACATTCAAGCCTAATTTGACTGTGGCTATAGATAGTAGTGGAGATTTCAAGAGCATCAATGAGGCATTGAAGCATGTGCCTGAGAACAATGAAGAGCCATTTGTCATATACATCAAGGAAGGCATTTACCAAGAGTAA 879 0.4243 MSGGDAQKGKSIAIIGVSALLLVAMVVAVTVSYNKNGSENDIEDNRKHHVASTIKAVQTLCHPTDYKKECEESLIAEAGNTTDPKELIKIAFNVTIKKIGDKLKETELLHEVEKEPRAKMALDTCKQLMDLSIEEFKRSIDEICEFDLTNLDKILMNLKVWLSGAVTYQDTCLDGFENTTSEASAKMKELLTTGMHMSSNALAIVSDFADTVSDWNVTKLFGRRLLQDSETTPSWVDERTLLGTNTSTFKPNLTVAIDSSGDFKSINEALKHVPENNEEPFVIYIKEGIYQE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00018 292 PANTHER PECTINESTERASE 15 292 - -
Sebi595g00018 292 FunFam Pectinesterase 53 209 - -
Sebi595g00018 292 Pfam Plant invertase/pectin methylesterase inhibitor 56 204 IPR006501 GO:0004857
Sebi595g00018 292 CDD PMEI-like_3 59 209 - -
Sebi595g00018 292 NCBIfam pectinesterase inhibitor domain 51 205 IPR006501 GO:0004857
Sebi595g00018 292 Gene3D - 209 292 IPR012334 -
Sebi595g00018 292 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 208 IPR035513 -
Sebi595g00018 292 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 208 IPR035513 -
Sebi595g00018 292 Pfam Pectinesterase 252 292 IPR000070 GO:0030599|GO:0042545
Sebi595g00018 292 SUPERFAMILY Pectin lyase-like 246 292 IPR011050 -
Sebi595g00018 292 SMART PMEI_2 52 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00018 Sebi-Chr595 204956 205834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00018 5 292 Carbohydrate Esterase AT3G05610 42.466 5.79e-79 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi595g00018 K01051 - gmx:100820556 450.669