Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00015 ATGAGCAGGGTTAATAGGCCTCCACTATCCTTGTCAAGATTGATTAGGTTTATGAAGGGGAAGGAAGGTAAGACTGCTGTGGTGGTGGGGACTGTAACTGATGATATACGTGTTTATGAAGTTCCAGCCTTGAAAGTTACAGCACTCAGGTTTACAGAGACTGCACGAGCAAGAATAGAGAAGGCAGTTGTATATGAGCTGAGTTATACTTTTGATTTTGTCCATGTTGTTGAATATATTGCCTGCATTTCCCTTGTTGCATTACCTGCCAGTTTATGTAATATTCTGGTCCTTCTTAGAGGCCCGAAGAATGCTCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACCAAGCCTTATGTGCGAGCAAAGGGAAGGAAGTTTGAGAGGGCTAGAGGGAGGAGGAACAACCGTGGATTTAGAGTTTGA 447 0.4519 MSRVNRPPLSLSRLIRFMKGKEGKTAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAVVYELSYTFDFVHVVEYIACISLVALPASLCNILVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNNRGFRV 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00015 148 Pfam Ribosomal protein 60S L18 and 50S L18e 1 148 IPR021131 -
Sebi595g00015 148 PANTHER 60S RIBOSOMAL PROTEIN L18 1 148 IPR000039 GO:0003735|GO:0005840|GO:0006412
Sebi595g00015 148 Gene3D - 78 148 - -
Sebi595g00015 148 Gene3D - 1 73 - -
Sebi595g00015 148 SUPERFAMILY Ribosomal proteins L15p and L18e 2 62 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00015 Sebi-Chr595 192417 193330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00015 1 148 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 67.568 4.56e-64 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi595g00015 K02883 - mnt:21394382 171.014