Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi595g00011 ATGAATCTCCCAGCCAATCAACCTCTTCATCGCATAACTGCATCGTCGTCCACCGTCGCTTTGTCATCGCACCATCGCTCCAAATACACCATCACGCCGTGCGAAGTGCGAACGCCATCACCACCGCGTGCTCATACTGTTGTCGCGTCATGTATCTTCCTCATCCTCACCCCGTTGGAGATCTGCATAGTTTCACAGTTGAAAGTGAAAAAAATGAGTCGAGGAGGTGCAGCTGGTCCCAAAGGGAAGAAGAAGGGTGTGACATTCACCATTGACTGCGCCAAGCCAGTGGAGGACAAGATCATGGACATTGCATCCCTCGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAGGCCGGTGCTCTTGGTGATACCGTCTCTGTTACACGCGAGAAGACCAAGATCACTGTCACTTCTGACAGCAACTTCTCCAAACGGTATCTGAAGTACTTGACAAAGAAGTACTTGAAGAAACACAATGTACGGGACTGGCTCAGAGTGATTGCTTCTAACAAGGATAGAAATATTTATGAACTTAGGTACTTCAACATTGCTGAGAATGAAGGAGAGGAAGAAGATTAA 588 0.4762 MNLPANQPLHRITASSSTVALSSHHRSKYTITPCEVRTPSPPRAHTVVASCIFLILTPLEICIVSQLKVKKMSRGGAAGPKGKKKGVTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVSVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi595g00011 195 PANTHER 60S RIBOSOMAL PROTEIN L22 68 195 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sebi595g00011 195 FunFam 60S ribosomal protein L22-2 76 195 - -
Sebi595g00011 195 Pfam Ribosomal L22e protein family 85 193 IPR002671 GO:0003735|GO:0005840|GO:0006412
Sebi595g00011 195 Gene3D - 77 195 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi595g00011 Sebi-Chr595 143386 148051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi595g00011 72 195 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 2.81e-69 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi595g00011 K02891 - jre:109012705 224.172