Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi594g00016 ATGAAGCTAAGTCCTGATTACCTGAGAACATATACCCCAGAAGGAATTGATGAAATGGAATGGGAAAACTTAGAGACAAGCGATAACCCTTTGGATCCAACACCTAGAAGTTGCGGCAAAGAAGACAAGATCATGGCTGTGTTCTTTCGGTTTGGAGAAGGTGTTGCCAGAAGCAGAAAAGAGCCTCAGAAGCTGTTCAAACTGTTGGACATGTTTGAATCCTTGAGAAACTCAAAACCCCATATAATGGAAATCTTTGATGGTGAAGCTGGAGTGGATATCTGCACACGGTTTAGAGAGCTTGAAAAGCTCATCATCGATGCTTCAAGCAAAGTTTTCTGGGAATTCGGCCTACAAATTGAAGGGAATGCTGATGGTCTTCCACCCCCACAAGATGGTTCTGTTCCAAAACTTGTAAGATATGCTATTAACTACCTCAAATACCTTGCCACGGTGAATTACAGAACAACCATGGCTAAGGCTCTTCAAAGAAACATCGACTCTAAACGTTCTAGTTGCAGGGACAGAATTTTGATCCATATATTCATGATGAACACGTACTGGTACATGTATATGAGAACCAAGAACACAGAGCTTGAGGATCTGAGGGAACAAGGGAAAGAAAGCATTGGAAGGCTAGTGACAGAGAAGATTGAGACTTTCTTCAAGTGCTTAGATGAGATTTGTGAGAGGCATAGAGTGTGTTATAGTATACCAGATGTGGATTTGAGGGAACAAATGAGAGAAGCTACAATGAAGCTTGTGGTGCCGGCTTATGCAGAGTTCTTGGAGTCTTATTCAGGATTGTTGCAGAGGAAAGTGTATCCGAGTCCTGAAAGGTTACAAGGGTTGTTGAGGAAGGCTTTTGATGGTGATGCTGATGTGAGGTTGAAACGGCGAAGCTCTACTTCTAATGATTGGAATGGTGGACGTAACTCTGCCTCCATGGAAGGTGATAACAGGCAGTCCAGATGA 975 0.4287 MKLSPDYLRTYTPEGIDEMEWENLETSDNPLDPTPRSCGKEDKIMAVFFRFGEGVARSRKEPQKLFKLLDMFESLRNSKPHIMEIFDGEAGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGLPPPQDGSVPKLVRYAINYLKYLATVNYRTTMAKALQRNIDSKRSSCRDRILIHIFMMNTYWYMYMRTKNTELEDLREQGKESIGRLVTEKIETFFKCLDEICERHRVCYSIPDVDLREQMREATMKLVVPAYAEFLESYSGLLQRKVYPSPERLQGLLRKAFDGDADVRLKRRSSTSNDWNGGRNSASMEGDNRQSR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi594g00016 324 MobiDBLite consensus disorder prediction 302 324 - -
Sebi594g00016 324 Gene3D Exocyst complex component Exo70 207 299 - -
Sebi594g00016 324 Gene3D Exocyst complex component Exo70 40 206 - -
Sebi594g00016 324 PANTHER EXOCYST COMPLEX PROTEIN EXO70 202 290 IPR004140 GO:0000145|GO:0006887
Sebi594g00016 324 SUPERFAMILY Cullin repeat-like 43 290 IPR016159 -
Sebi594g00016 324 MobiDBLite consensus disorder prediction 300 324 - -
Sebi594g00016 324 Pfam Exo70 exocyst complex subunit 45 163 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi594g00016 324 Pfam Exo70 exocyst complex subunit 213 285 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi594g00016 Sebi-Chr594 499639 500916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi594g00016 45 277 EXO70 exocyst subunit family AT4G31540 26.421 1.35e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi594g00016 - - ahf:112697742 453.366