Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi593g00012 ATGTCAATGTTGGATCTCAATGTTGACATTATCCATGCTGGTGCTGATTCAACCTGTTCTCAAAAGGGGTTGCTACTGCAAAGTTTTCCACCTGAACTTGTATTCTTTAGGGATTGTGGGAAACAGGTCTATTTGGGTAAGTGGATACTTGATTTGGTTGGTGGATTTGACACTGCTCATGCTGCTGCAAGAGCGTATAATAGGGATGCTATTAAGTTTAGGGGAGTTGATGCTGATATAAACTTTAGTTTGAGTGATTATGAGGAAGATTCGAAGCAGATGAAAGGTTTGAGTAAGGAAGAATTTGTGCTCATGATTCATCGACAAACCAATGGAATCTTGAGGATAAGTTCAGCATACAGAGGTGGATTAGCTCTTCACAAATATGGTCAAGGAGCAAGAATGGGACCATTTGTTAGCAAAACGTGA 429 0.4009 MSMLDLNVDIIHAGADSTCSQKGLLLQSFPPELVFFRDCGKQVYLGKWILDLVGGFDTAHAAARAYNRDAIKFRGVDADINFSLSDYEEDSKQMKGLSKEEFVLMIHRQTNGILRISSAYRGGLALHKYGQGARMGPFVSKT 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi593g00012 142 SMART rav1_2 34 89 IPR001471 GO:0003700|GO:0006355
Sebi593g00012 142 Gene3D AP2/ERF domain 27 85 IPR036955 GO:0003700|GO:0006355
Sebi593g00012 142 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 139 - -
Sebi593g00012 142 SUPERFAMILY DNA-binding domain 52 84 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi593g00012 Sebi-Chr593 384021 384905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi593g00012 38 141 AP2-EREBP Transcription Factor Family AT2G28550 65.714 8.83e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi593g00012 K09284 - gmx:100776138 137.887