Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi593g00010 ATGATTGGTGTTGGAATCATACTATTCCGAAGAAAAGCCAAACACCTTGATGAAGAGTCCAAAAGCATTGAAAATGATATTCAGTCTATTTGCATGGTATGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACAAATGACTTCAATGACAAGTACTGCATCGGAAAAGGAGGATTTGGGAGTGTTTATAAAGCAGAATTACCTACAGGTCTAGTAGTGGCTGTTAAAAGGCTCAACATATCAGATTCAGATGACATTCCAACAGTGAACCGCCAGAGTTTTTTGAATGAGATAAAAACATTGACAGGAGCGAGGCACCGCAATATAATAAAGCTTTATGGTTTCTGTTCTAGAAGGAAACAAATGTTTTTGGTTTATGAATATGTAAACAAAGGAAGTTTAGGAAAGGTGTTGTATGGAGAAGAAGGAAAATTGGAGCTAAGCTGGGCTACAAGGGTGAAAATTGTGCAGGGAATAGTACATGCAATTTCCTACCTGCACAAGCTAGCACAAACTATGAGGGTCACTGATAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTAGAGATAATGATGGGAAACCACCCTGGAGAACTGTTGGCTACACTGTCTTCACACAAGTCTTTGTCATCAATAGAGGATTCACAGGTTCTTCTGAAGGATGTGCTAGACCAACGCCTTCCACCTCCAATAGGCCAATTAGCTGAAGCAATAGTGTTCACAGTGAGTGTAGCTTTGGCATGCACGCGTGCAGCTCCAGAGTCCAGACCCATGGTGCGTTCTGTGGCACAAGAACTATTAGCTACTACACAGGCTTGTCTTTCTGAGCCATTTAGCATGATAACCATAAGCAGTTTTACCGGGTTCCAGAAATAG 891 0.4141 MIGVGIILFRRKAKHLDEESKSIENDIQSICMVWGRDGKFTFSDLVKATNDFNDKYCIGKGGFGSVYKAELPTGLVVAVKRLNISDSDDIPTVNRQSFLNEIKTLTGARHRNIIKLYGFCSRRKQMFLVYEYVNKGSLGKVLYGEEGKLELSWATRVKIVQGIVHAISYLHKLAQTMRVTDKCDVYSFGVVALEIMMGNHPGELLATLSSHKSLSSIEDSQVLLKDVLDQRLPPPIGQLAEAIVFTVSVALACTRAAPESRPMVRSVAQELLATTQACLSEPFSMITISSFTGFQK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi593g00010 296 FunFam Leucine-rich repeat receptor protein kinase MSP1 14 132 - -
Sebi593g00010 296 SUPERFAMILY Protein kinase-like (PK-like) 32 271 IPR011009 -
Sebi593g00010 296 ProSiteProfiles Protein kinase domain profile. 52 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi593g00010 296 PANTHER LEUCINE RICH REPEAT KINASE 2 17 171 - -
Sebi593g00010 296 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Sebi593g00010 296 Pfam Protein kinase domain 54 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi593g00010 296 Gene3D Transferase(Phosphotransferase) domain 1 172 281 - -
Sebi593g00010 296 Gene3D Phosphorylase Kinase; domain 1 12 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi593g00010 Sebi-Chr593 140109 141282 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi593g00010 6 171 Receptor kinase-like Gene Family AT4G08850 44.910 4.46e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi593g00010 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi593g00010 - - gmx:100786462 405.216