Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi593g00005 ATGGCTATGGGAAGGAGTTACATTGATAATAAAGATTTTGAAGAGGAGAAAGAATTCTACAGAAACGCTGTGAATTTGAACGAAAAGCAAGGAAAGAGAGGCCTACTAGAGACCAAAGACAAAAGAAAAGATGACCAGATTAAAGATGATGACTATCTTTTGGGTGAAGCTAGGCAACCACTATGGCGCAAAGTGGCAGTACCTTCAAGCCTAATCAACCCATATCGCATAGTCATCATCCTCCGTCTCATAATCCTACTTTTCTTCTTCCAATTTCGTATCACAACACCAGTGCATGACGCATTTGCCTTGTGGCTAATCTCTGTGGTGTGTGAGTTCTGGTTAGCACTGTCTTGGTTTGTTGACCAGTTCCCCAAGTGGTTCCCCATCACTAGAGAAACTTACTTGGACCGTTTGTCTATAAGGTTCGAGCGTGAAGGGGAACCAAGCCTTCTAGCCCCACTTGATGTCTTTGTCACCACTGCTGACCCTTTGAAGGAACCACCCATCATCACTGCAAACACTGTTCTATCAGTGTTATCTGTTGATTACCCTGTTGAGAAGGTCACCTGTTATGTCTCAGATGACAGTGCATCTATGCTTCTCTTTGATACACTGGCTGAGACTTCTGAGTTTGCAAGAATATGGGTTCCTTTTTGTAAAAAGTACAATATTGAGCCAAGGGCTCCCGAGTTTTATTTCTCTCAGAAAATTGATTACTTGAAAGATAAGGTGCACCCCACATTTGTAAAGGATCGCAGGGCCATGAAGGTGAGAGAGTATGAAGAATTTAAAGTGAAAATTAATGCATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAAGGGTGGGTGATGCAGGATGGTAATCCATGGCCTGGGAATGACTCTCATGATCATCCAGGAATGATTAAGGTCTATCTGGGAAGTTCTGGTGCACGGGACAAGGATGGGAAGGAACTACCAAGGCTTGTGTATGTTTCACGGGAAATACGTCCCTGCTATCAACACAACAAAAAAGCTGGTGCCATGAATGCTTTGCTTCGAGTTTCTGCTGTGCTTACCAATGCACCTTTCGTGTTGAATCTGGATTGTGATCATTACACCAATAATAGCAAAGCTATAAGGGAGGCTATGTGCTTTTTAATGGACCCCCAACTTGGGAAGAAGCTTTGTTATGTTCAATTTCCAAAAAGGTTTGATGGTGTTGATCACCATGACAGATATTCCAATCACAATACTATATTCTTTGATATCACCATGAAATGCCTTGATGGGATTCAAGGTCCGATTGATGAAGAATGGCTTGATGGCTATGAGGAGCAAGAGGAATCATCCTTCATGTCCCAAAAAAAATTTGAGAAACGATTTGGACAGTCACCAGTTTTCATTGCTTCCACTTTGATGGAAGGTGGTGGACTTCCTAAAGGCATCAATTCACGATTACTAATTAAGGAAGCCATTCATGTTATAAGTTGTGGTTATGAAGACAAAACTGAATGGGGCAAAGAGATTGGGTGGATTTATGGCTCAGTCACAGAAGATATCTTAACTGGGTTCAAGATGCATTGCAGAGGATGGAAATCAGTGTACTGCATGCCTAAGAGAGCAGCTTTTAAAGGGTCTGTTCCAATAAATCTATCAGACCGATTGCACCAAGTTCTGAAATGGGCTCTTGGTTCGGTTGAGATTTTCCTTAGTGGCCATTGTCCATTATGGTATGGATATAGTGGAAAATTGAAGTGGCTGCAAAGACTGGCTTACATTAATATCATTGTTTACCCATTCACTTCCATCCCTCTACTTGTATACTGTGCAATTCCAGCTGTTTGCCTTCTAACTGGAAAGTTCATCATCCCCATTCTGTCAAACCTTGCTAGCATTTGGCTAATGGCTCTATTTATCTCCATAATTTTAGCTTGTGTGCTAGAGCTTAGATGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGAGGTGTTTCAGCACATCTTTTTGCAGTATTTCAAGGTATCCTCAGAGTTATTGCAGGAGTAGACACTAATTTAAAGGTGAGAGCAAAAGCAGCAGAAGACACTGTATTTGGAGAACTCTATCTCTTCAAGTGGACTACTCTACTTATCCCACCAACCAGTCTAGTAATCTTGAACATGGTGGGAATTGTGGCTGGCATCTCAAATGCCATTAACAATGGCTATGACTCATGGGGACCATTGTTTGGAAAACTATTTTTCTCCTTTTGGGTGATCATGCACTTATACCCTTTCCTAAAAGGTCTAATGGGAAGGCAAAACAGGACTCCTACAATAGTAGTCCTCTGGTCAATACTTCTAGCACTAATTTTCTCAATAATTTGGGTTCGCATTGATATCTTCTTGCCCAAGCAAACAGGTCCAGTACTCAAACAGTGTGGATTAGAATGCTAA 2442 0.4177 MAMGRSYIDNKDFEEEKEFYRNAVNLNEKQGKRGLLETKDKRKDDQIKDDDYLLGEARQPLWRKVAVPSSLINPYRIVIILRLIILLFFFQFRITTPVHDAFALWLISVVCEFWLALSWFVDQFPKWFPITRETYLDRLSIRFEREGEPSLLAPLDVFVTTADPLKEPPIITANTVLSVLSVDYPVEKVTCYVSDDSASMLLFDTLAETSEFARIWVPFCKKYNIEPRAPEFYFSQKIDYLKDKVHPTFVKDRRAMKVREYEEFKVKINALVAKAQKKPEEGWVMQDGNPWPGNDSHDHPGMIKVYLGSSGARDKDGKELPRLVYVSREIRPCYQHNKKAGAMNALLRVSAVLTNAPFVLNLDCDHYTNNSKAIREAMCFLMDPQLGKKLCYVQFPKRFDGVDHHDRYSNHNTIFFDITMKCLDGIQGPIDEEWLDGYEEQEESSFMSQKKFEKRFGQSPVFIASTLMEGGGLPKGINSRLLIKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRAAFKGSVPINLSDRLHQVLKWALGSVEIFLSGHCPLWYGYSGKLKWLQRLAYINIIVYPFTSIPLLVYCAIPAVCLLTGKFIIPILSNLASIWLMALFISIILACVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGILRVIAGVDTNLKVRAKAAEDTVFGELYLFKWTTLLIPPTSLVILNMVGIVAGISNAINNGYDSWGPLFGKLFFSFWVIMHLYPFLKGLMGRQNRTPTIVVLWSILLALIFSIIWVRIDIFLPKQTGPVLKQCGLEC 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi593g00005 813 Pfam Cellulose synthase 155 430 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi593g00005 813 Pfam Cellulose synthase 437 806 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi593g00005 813 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 58 778 - -
Sebi593g00005 813 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 630 IPR029044 -
Sebi593g00005 813 Coils Coil 10 30 - -
Sebi593g00005 813 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 277 431 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi593g00005 Sebi-Chr593 60496 64901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi593g00005 49 813 Cell Wall Biosynthesis AT5G17420 67.439 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi593g00005 K10999 K20924 gmx:100777278 1318.52