Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi593g00003 ATGAGGGTCACTGATAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTAGAGATAATGATGGGAAACCACCCTGGAGAACTGTTGGCTACACTGTCTTCAAACAAGTCTTTGTCATCAATAGAGGATTCACAGGTTCTTCTGAAGGATGTGCTAGACCAACGCCTTCCACCTCCAACAGGCCAATTAGCTGAAGCAATAGTGTTCACAGTGAGTGTAGCTTTGGCATGCACGCGTGCAGCTCCAGAGTCCAGACCCATGATGCGTTCTTTGGCACAAGAACTATTACCTACTACACAGGCTTGTCTTTCTGAGCCATTTAGCATGATAACCATAAGCAGTCTTACCGGGTTCCAGAAATAG 363 0.4601 MRVTDKCDVYSFGVVALEIMMGNHPGELLATLSSNKSLSSIEDSQVLLKDVLDQRLPPPTGQLAEAIVFTVSVALACTRAAPESRPMMRSLAQELLPTTQACLSEPFSMITISSLTGFQK 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi593g00003 120 SUPERFAMILY Protein kinase-like (PK-like) 3 102 IPR011009 -
Sebi593g00003 120 PANTHER LEUCINE RICH REPEAT KINASE 2 1 103 - -
Sebi593g00003 120 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
Sebi593g00003 120 Pfam Protein tyrosine and serine/threonine kinase 3 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi593g00003 Sebi-Chr593 8668 9030 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi593g00003 2 95 Receptor kinase-like Gene Family AT3G57830 35.849 3.49e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi593g00003 PK_Tyr_Ser-Thr 2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi593g00003 - - gmx:100786462 194.126