Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi592g00059 ATGAGCCTGAGCATGAGCCAAAACCACAGCCATGACGACACCATCACCTCAGCCATCCACGATGACAACAACAAGCCAGATGATCATGCGCACGACATGGTGATGCCTGGGTTTCGTTTCCACCCAACTGAAGAAGAGCTCGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCGTTTCAATGTTGAGCTTATTACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCTGCCTTAGCAGCAATTGGTGAGAAGGAGTGGTACTTTTATGTGCCTAGAGATAGAAAGTACCGCAACGGTGATCGTCCCAATCGTGTTACAACCTCTGGGTATTGGAAAGCAACAGGAGCCGATAGGATGATTCGAACCGAGAACTTCAGGTCTATCGGGCTGAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCAAAAGGCCTCCGAACCAGTTGGATCATGAATGAGTATCGTTTGCCTCAACATGAAACTGAAAGATATCAGAAGGCTGAGATATCACTTTGCCGTGTTTATAAGAGAGCTGGTGTGGAAGACCATCCCTCCCTCCCTCGTTGTCTCCCAACCCGGCCATCATCATCACATTCAGACATTAAGAATAAGCCAAATGAAACGCTGGGTCAGATGTCACTACTCCTGCTCTTGGGGGCTAATTCCCAAGCACAATGCTTACCGTACACTTGGACTACCGCAGTTCCAGTGGAGGAGATACTCATGCAGCAATCTAAGCAACCACAAGCAACCTTCTTCCCAGCGAACATTGCAATGATGGATGATCTCAATAGGCTGGTAAGTTATCAACAACAATTCTACAGTTTCCCCAATCAGTTCTCTAGTTTGCTAATGCAACCACCACCTGTGGCTCTAAACTCGCTACCCATCTCACTTCCAACCGCCTTCTCTGAACGACAGTGGGAGTGGAATCCAACCCCTGAGGCTGAGGCCAACCGAGAGGACAATAACACGCCCTTCAAGTAA 999 0.4825 MSLSMSQNHSHDDTITSAIHDDNNKPDDHAHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGLRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTRPSSSHSDIKNKPNETLGQMSLLLLLGANSQAQCLPYTWTTAVPVEEILMQQSKQPQATFFPANIAMMDDLNRLVSYQQQFYSFPNQFSSLLMQPPPVALNSLPISLPTAFSERQWEWNPTPEAEANREDNNTPFK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi592g00059 332 MobiDBLite consensus disorder prediction 313 332 - -
Sebi592g00059 332 Pfam No apical meristem (NAM) protein 36 160 IPR003441 GO:0003677|GO:0006355
Sebi592g00059 332 MobiDBLite consensus disorder prediction 14 31 - -
Sebi592g00059 332 MobiDBLite consensus disorder prediction 1 31 - -
Sebi592g00059 332 FunFam NAC domain-containing protein 35 43 184 - -
Sebi592g00059 332 Gene3D NAC domain 43 184 IPR036093 GO:0003677|GO:0006355
Sebi592g00059 332 ProSiteProfiles NAC domain profile. 34 181 IPR003441 GO:0003677|GO:0006355
Sebi592g00059 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 32 248 - -
Sebi592g00059 332 SUPERFAMILY NAC domain 34 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi592g00059 Sebi-Chr592 590970 593056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi592g00059 33 208 NAC Transcription Factor Family AT2G02450 86.932 1.89e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi592g00059 NAM 2.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi592g00059 - - gmx:100792622 442.195