Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi592g00044 ATGATGTCTGAAGAGGCTGGATCCATGTTGGTAGTTTATGATGATCCCTCTGACCAACACTCACTATCGTTGGGTGATACAAGCAGCACAGAGGAGTCACCTGATGAAACCAGGCTCTCCTTGGAAACAACTAATGATGCTATTCCATATATTGGTCAAAGGTTTGCCACTCATGATGCTGCTTATGAATTCTATAGTGAATTTGCCAAGAGGTGCGGCTTCTCAATTAGACGTCACCGTACAGAGGGAAAAGATGGGGTTGGAAAAGGACTTACTAGACGCTACTTTGTTTGTCACCGTGCTGGCAACACTCCTGTCAAAACATCAACTGAAAGTAAACCTCAAAGAAATAGAAAATCTTCTCGATGTGGGTGTCAGGCTTACATGCGGATAAGCAAAACAACAGAATTTGGAGCTCCAGAATGGCGTGTGACTGGATTTGCTAATCACCATAATCATGAACTTCTAGAACCAAACCAAGTTCGATTCCTTCCTGCATACAGGACTATCTCTGATGCTGACAAAAACCGAATCCTTATGTTTGCCAAAACAGGGATTTCTGTTCATCAAATGATGAGGCTTATGGAGCTCGAGAAGTGTGTGGAACCTGGATATTTGCCTTTTACTGAAAAGGATGTAAGGAATTTACTTCAGTCATTTAGGAAATTAGATCCAGAGGAAGAAAGCTTAGATTTATTAAGAATGTGCAGAAATATTAAGGAGAAAGATCCTAATTTTAAATTTGAGTACACACTTGATACAAACAACCGTTTGGAGAATATTGCCTGGTCATATGCCTCATCAATCCAATTGTACGATATGTTTGGTGATGCCGTGGTGTTTGATACAACACATCGCCTGACTGCATTTGACATGCCGCTAGGGATATGGGTTGGAATTAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGATGAAACTGTCAGATCATTTTCCTGGGCAGTGAAGGTTTTCTTAGGGTTTATGAACGGGAAGGCTCCACAGACTATATTAACTGATCAAAATATATGTCTCAAAGAAGCACTATCCACAGAAATGCCAGCAACAAAACATGTTTTCTGCATATGGATGATAGTAGCGAAGTTTCCATCTTGGTTTAATGCTGTTCTAGGGGAACGATACAATGAATGGAAGGCTGAATTTTATAGACTTTATAATCTTGAGTCAGTTGAGGATTTTGAACTAGGCTGGAGGGAAATGGTTTGTTCCTTTGGGCTGCATTCCAATCGACACGTGGTTAATTTGTATAGCTCACGGTCACTTTGGGCATTGCCATTTTTGAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTGAGTGCACAGACACGGCTAGCTCACTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGAGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGCGCCCCCATGGAATCACACGCTGCCACCGTCCTCACTCCCTATGCCTTTTCAAAGCTTCAAGAGCAACTTGTGTTGGCTGCACACTATGCGTCTTTTTCAATTGAAGATGGATTTCTTGTGAGACACCACACAAAAGCTGAAGGAGGTCGGAAAGTTTATTGGTCCCCTCAGGAGGGAATTATAAGTTGCAGCTGCCACCAGTTTGAATTCTCTGGAATTCTATGTAGGCATTCTCTTAGAGTTCTTTCAACAGGAAATTGTTTTCAGATCCCAGATAGATATCTTCCCATTCGTTGGCGTCGTATGAGCATGCCCTCTTCTAAGCTTCTTCAAAATGCACCAAGTGATCATGCTGAAAGAGTTAAGTTATTACAAAATATGGTTTCATCTCTGATTACAGAATCTGCTAAATCTAAGGAACGATTAGATATTGCAACAGAACAAGTTTCCATCATTCTGTCTCGCATAAGAGAGCAACCAATTTCATTACAAGGTAGCAGGGATATTTCTTCCATTAATAGGAATCTTTGA 2043 0.4092 MMSEEAGSMLVVYDDPSDQHSLSLGDTSSTEESPDETRLSLETTNDAIPYIGQRFATHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTEFGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDADKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESLDLLRMCRNIKEKDPNFKFEYTLDTNNRLENIAWSYASSIQLYDMFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLRDETVRSFSWAVKVFLGFMNGKAPQTILTDQNICLKEALSTEMPATKHVFCIWMIVAKFPSWFNAVLGERYNEWKAEFYRLYNLESVEDFELGWREMVCSFGLHSNRHVVNLYSSRSLWALPFLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATVLTPYAFSKLQEQLVLAAHYASFSIEDGFLVRHHTKAEGGRKVYWSPQEGIISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDRYLPIRWRRMSMPSSKLLQNAPSDHAERVKLLQNMVSSLITESAKSKERLDIATEQVSIILSRIREQPISLQGSRDISSINRNL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi592g00044 680 Pfam SWIM zinc finger 561 588 IPR007527 GO:0008270
Sebi592g00044 680 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 654 IPR031052 GO:0006355
Sebi592g00044 680 Pfam MULE transposase domain 279 371 IPR018289 -
Sebi592g00044 680 ProSiteProfiles Zinc finger SWIM-type profile. 554 590 IPR007527 GO:0008270
Sebi592g00044 680 SMART 26again6 565 592 IPR006564 GO:0008270
Sebi592g00044 680 MobiDBLite consensus disorder prediction 1 39 - -
Sebi592g00044 680 Pfam FAR1 DNA-binding domain 63 156 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi592g00044 Sebi-Chr592 394859 397533 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi592g00044 MULE 1.5e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi592g00044 - - gmx:100810717 1334.32