Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi592g00018 ATGGCAGCTGAGTTTGATTATGAAGAGATCTTAAAAGCAACAGATAACTTCCATCCTACAAGGCTCACAGGCAAAGGAAGCCATGGATTAGTCTATAAAGCTTTACTCTTTAAAGATAACTTGGAGGTTGCTGTGAAGAAGCCATCTCAGTCTCTTCTTCAAGATAACGAAATTCGAGTGTTCTCCTCTCTACGCAGTGATGAAATCCCTCATCCTCATGTCCTTCAACTTCTAGGAACCAGTAGTTATTATTATGGTCATGAAGAATGTGACTCGTTCAAGCAGAAGCACAAGGTGATTGTGATGGAGCTCATGCCTAATGGTTCCATCCATGATTGGCTCCATACGGCTACTAAAACCCCACTGACATGGCCGAAACGCATCGAAATCGCCATGCAGATCGCGCGTGCTCTGCAGTTTCTTCATGAAAGGAAGCCTTTGGTGATCCACAAAGACATAAAGTGA 465 0.4344 MAAEFDYEEILKATDNFHPTRLTGKGSHGLVYKALLFKDNLEVAVKKPSQSLLQDNEIRVFSSLRSDEIPHPHVLQLLGTSSYYYGHEECDSFKQKHKVIVMELMPNGSIHDWLHTATKTPLTWPKRIEIAMQIARALQFLHERKPLVIHKDIK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi592g00018 154 ProSiteProfiles Protein kinase domain profile. 17 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi592g00018 154 Pfam Protein tyrosine and serine/threonine kinase 22 153 IPR001245 GO:0004672|GO:0006468
Sebi592g00018 154 PANTHER OS01G0253100 PROTEIN 3 154 - -
Sebi592g00018 154 SUPERFAMILY Protein kinase-like (PK-like) 5 154 IPR011009 -
Sebi592g00018 154 Gene3D Transferase(Phosphotransferase) domain 1 5 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi592g00018 Sebi-Chr592 146676 147140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi592g00018 5 154 Receptor kinase-like Gene Family AT3G59420 40.764 8.14e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Sebi592g00018 PK_Tyr_Ser-Thr 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi592g00018 - - gmx:100305389 168.703