Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi592g00012 ATGAACCCGTTTTCCGTCGTTGATCAAAGATCCATGGCTAACATTTTGATATTCATATTCTTCTCCATCATCGTCTCCATATCACCCTCTTATGGATACGATCCGTTGGATCCTTTGGGCAACATCACCATCAAATGGGATTTCTTGTCTGATAATGGAGACACAGTCGATGTGAAGGTTTCAATATACAACTTGCAACTATTTCGCCATGTGGAAGAGCCTGGTTGGAAATTGGGTTGGGCTTGGAGGGGTGATGAGGTGATTTGGGCAATGTTGGGAGCAGAGGCTACAGAGCAAGGGAATTGCACAAGATTCAGGGGACAGAATAAACCCCATTGTTGTGAGAAGGAGCCAGTTATTATTGATCTCATGCCTGGAACCCCATACAACCTGCAGACTGCCAATTGCTGTAAAGGAGGGGTCCTCACATCCATCACTCAAGATCTTACCAAATATGGTGCCACCTTCCAGATGAATTATGCCAAATCATCACAATACTTTCCAGGTGCCTCCAATTTTAGCATGCCTGAAAATTTCACCCTTGGAATTCCTGGTTATAGCTGTGGCACATCATTTCAAGTCCCACCAACCAAGTTCACCAAAGATGGACACCGATGGCAGCAAGTCTTAGAGACGTGGAATGTGACATGTATTTACTCCCAGTTTCTAGCATCACCAGCCCCAAAATGCTGTGTCTCCTTGTCTTCATTCTATAATAGTACCATTGTTCCTTGCCCCATATGCAGCTGTAATTGCCAAGGTCTACCAGGAGCAAATTGCGTGAATTCTGATAAGAGTTCAGTGTTGCAACTGCCACAAGCGCATGAGACAGAGACAGTGGTGAGGTGTACACATCACATGTGCCCCATTCGTGTTCACTGGCATGTGAAACAAAGTTATAAAGAGTATTGGAGGGTCAAGATCACAATCACAAATCTGAACTTGGTCAAAAACTACTCCCAGTGGAATTTGGTGGTTTTACACCCTAACTTGCGAAGTATAACCCGAGTTTTCAGTTTCAACTACCAGCCACTGAAAATTTATGGAAATCTCAATGATACAGGGATGTTTTGGGGGCTAGAGTACTACAATGACTTGTTGCTGGCACATGGGGACAATGGGAATGTACAAACAGAAGTGTTACTGCACAAAGATCGAGGAGAATTCACCTTCAAAGAAGGATGGACTTTTCCAAGAAAAATTTCATTTAATGGTGATGAGTGTGTCATGCCATCTCCTGACGCGTACCCTAGGCTCCCCAACACAGCCATGGCCACAACTACCACAACCTCCATCATTATTTTCTTCTCAATGTCACTGCCTCTGCTCTCAATATTGATCTAG 1344 0.4405 MNPFSVVDQRSMANILIFIFFSIIVSISPSYGYDPLDPLGNITIKWDFLSDNGDTVDVKVSIYNLQLFRHVEEPGWKLGWAWRGDEVIWAMLGAEATEQGNCTRFRGQNKPHCCEKEPVIIDLMPGTPYNLQTANCCKGGVLTSITQDLTKYGATFQMNYAKSSQYFPGASNFSMPENFTLGIPGYSCGTSFQVPPTKFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSSFYNSTIVPCPICSCNCQGLPGANCVNSDKSSVLQLPQAHETETVVRCTHHMCPIRVHWHVKQSYKEYWRVKITITNLNLVKNYSQWNLVVLHPNLRSITRVFSFNYQPLKIYGNLNDTGMFWGLEYYNDLLLAHGDNGNVQTEVLLHKDRGEFTFKEGWTFPRKISFNGDECVMPSPDAYPRLPNTAMATTTTTSIIIFFSMSLPLLSILI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi592g00012 447 PIRSF COBRA 5 447 IPR006918 GO:0010215|GO:0016020
Sebi592g00012 447 PANTHER PROTEIN COBRA 20 437 IPR006918 GO:0010215|GO:0016020
Sebi592g00012 447 Pfam COBRA-like protein 58 220 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi592g00012 Sebi-Chr592 97968 100658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi592g00012 11 420 COBRA Gene Family AT1G09790 55.635 2.83e-166 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi592g00012 - - lang:109329241 719.539