Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi591g00012 ATGGCTGTTGTCAAGAGCAACAGCTGCACTGAACCTTGTACTTCATACAATTGTTACAAAGTGCCAGGCTTGACCGAAACCATATTAGATACAAATCATACCTCTAATTTGAAAGATCGGTATGAACTTGGGGAGCAGTTGGGTTGGGGTCAATTTGGTGTCATAAGAGCATGCTCTGATAGGTTGACAGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTGTGGATGATCTGAGGAGTGTAAAACTTGAGATTGAGATAATGGCTAAGCTATCTGGGCACCCAAATGTTGTTGATCTCAAGGCAGTTTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTTTGTGCGGGAGGGGAGTTGTTTCACCGATTAGAGAAGCATGGGCGGTTTTCTGAATCTGAAGCTAGGGTTCTCTTTAAGCATTTAATGCAGGTGGTCTTGTATTGTCATGAAAATGGGATTGTTCATAGGGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCCACCTACATAAAGCCTGGTATTTGCTTCTTTGCTTCTGTTGCACCTTGTGGAATTTTTATCTTCTTTGGAATTTCCATTGCTCCTATGAATATGTGTGGACAGAGTTTGCACGGGTTAGTTGGGAGTCCATTCTATATAGCTCCAGAGGTACTAGCTGGTGCATATAACCAGGCAGCTGATGTGTGGAGTGCAGGGGTTATACTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAATCCCGGATATTTGAAGCTGTTAAGGCAGCTGCCCTAAGATTCCCATCAGAACCTTGGGATCGCATTTCTGAATCAGCTAAAGATTTGATCAAGGGAATGCTATGTACAGAACCTTCTCAAAGGCTCACAGCCAAGGAGGTTTTAGATCATTGCTGGATGGAAAGCAATCAAACAAATCCTGAACAACTAAGTGAACATATTATCCGAAGTTGTGAAGACTGGGATGTTGGTGGCGGCTCATTTTCTACCCCTTTTATGTCCAGGAATCAGGACATCAGCTTCGGTGCCGGATCACCTACTTGTGATGCTCAATCACCCACATTCACATGCAGATCATCATTTTCTTCTTTTCTGGTGGAACCAGTTACTCCTTGTTTAGCTTCTGGTGGATTTTCATTTCAGAGCACAGACGATTCCCCTGGTCTGGAATTTGCTTCACCTATTCCCTCAATGCTTAGCTTTTCATTTCTCAGCCCTAGTTCTGTTGTTGAGCAAAAGAGTTGTAAATTAGAGTGCTCAGCTAACATTTCAGTTGTAAATGCAATTGCTGGAGAAGCAAGCTTGGGGAAGTTGCTTTTACCACCAGATTCTGTTGAACATGATATTAAAGAAACAGACCGCAAGCCTTCAGAGACTAAAAGGGCAGGTGGAATGAATGGACATAGGGTATTGGGAATCCACAATAAGAGAAACAGGACAATTGGACTTGGTGAGTGTGTACAACTTGACCTTGTGGTGACTGAATCAGTCATCCGTTGGTCATCATGCACTCAACTCCCTACATCTTTGAGATCATCTCTTGTCTGCTAG 1629 0.4303 MAVVKSNSCTEPCTSYNCYKVPGLTETILDTNHTSNLKDRYELGEQLGWGQFGVIRACSDRLTGEVLACKSIAKDRLVTVDDLRSVKLEIEIMAKLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVLFKHLMQVVLYCHENGIVHRDLKPENILLATRASSSPIKLADFGLATYIKPGICFFASVAPCGIFIFFGISIAPMNMCGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAAALRFPSEPWDRISESAKDLIKGMLCTEPSQRLTAKEVLDHCWMESNQTNPEQLSEHIIRSCEDWDVGGGSFSTPFMSRNQDISFGAGSPTCDAQSPTFTCRSSFSSFLVEPVTPCLASGGFSFQSTDDSPGLEFASPIPSMLSFSFLSPSSVVEQKSCKLECSANISVVNAIAGEASLGKLLLPPDSVEHDIKETDRKPSETKRAGGMNGHRVLGIHNKRNRTIGLGECVQLDLVVTESVIRWSSCTQLPTSLRSSLVC 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi591g00012 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 345 - -
Sebi591g00012 542 CDD STKc_CAMK 40 325 - -
Sebi591g00012 542 SUPERFAMILY Protein kinase-like (PK-like) 38 401 IPR011009 -
Sebi591g00012 542 Gene3D Transferase(Phosphotransferase) domain 1 128 347 - -
Sebi591g00012 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Sebi591g00012 542 FunFam Calcium-dependent protein kinase 1 43 126 - -
Sebi591g00012 542 Pfam Protein kinase domain 41 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi591g00012 542 ProSiteProfiles Protein kinase domain profile. 41 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi591g00012 542 SMART serkin_6 41 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi591g00012 542 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Sebi591g00012 542 Gene3D Phosphorylase Kinase; domain 1 43 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi591g00012 Sebi-Chr591 551943 554422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi591g00012 28 333 EF-hand Containing Proteins AT3G57530 43.791 3.83e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi591g00012 Pkinase 2.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi591g00012 - - gmx:100776088 874.004