Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi591g00002 ATGGACACGTCATCACCGGTGTCGGAGAGCTCTCCAAGGGCGATATTTTCCGACGAGGAGTTGCTTCTGGCGGCGAGCCACCCGAAGAAGCGTGCCGGGAGGAAGAAGTTCAGGGAGACTCGCCACCCAGTGTACAGGGGTGTGAGGAGGAGGAACTCCAATAAATGGGTGTGTGAAATGAGAGAGCCCAATAAGAAGACCAGGATTTGGCTAGGGACTTTTCCTACGCCAGAAATGGCGGCGCGGGCTCATGATGTGGCGGCGATGGCGCTGAGGGGCCGCTACGCCTGTCTTAATTTTGCCGACTCGGCATGGCGGCTCCCCGTTCCCGCCACCGCCGACCCCAAGGATATACAAAAAGCAGCTGCAGAGGCTGCTGAAGCTTTCAGGCCAAATCTGATTTTAAATACTAATGACATAAGCCACGATAGTGTCCTTCCTCCGCCGCCACTTCGGGCGGCGGAGGAACAGAGTGTGTTCTTTATGGAGGAGGAGTTGGCGATGCCGGAGTTGTTGAGGAATATGGTGCTTATGTCCCCAACACATTGTTTGGGGTATGAGTATGAAGATGCTGACTTGGACATTCAAGATGCTGAGCAGAAATTCTCTCCCGCGTTCTCACACTGTGTCTCTCTCTCTAAAGCCTTCCATTCTCCTTCATCTTCAAGCTTCTCCATTCCCTCCGTCGAGCTCCACGGCCGTCCTCCTCCTTCGTTCCCTCCGTCTTCATCAAGCTCGTCCGTCTTCCTCCGTCAAGTGCACGGTCTTCCTTCACCGTGA 780 0.5474 MDTSSPVSESSPRAIFSDEELLLAASHPKKRAGRKKFRETRHPVYRGVRRRNSNKWVCEMREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNFADSAWRLPVPATADPKDIQKAAAEAAEAFRPNLILNTNDISHDSVLPPPPLRAAEEQSVFFMEEELAMPELLRNMVLMSPTHCLGYEYEDADLDIQDAEQKFSPAFSHCVSLSKAFHSPSSSSFSIPSVELHGRPPPSFPPSSSSSSVFLRQVHGLPSP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi591g00002 259 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Sebi591g00002 259 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 192 IPR045277 GO:0003700
Sebi591g00002 259 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Sebi591g00002 259 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Sebi591g00002 259 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Sebi591g00002 259 MobiDBLite consensus disorder prediction 218 259 - -
Sebi591g00002 259 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Sebi591g00002 259 CDD AP2 45 103 IPR001471 GO:0003700|GO:0006355
Sebi591g00002 259 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677
Sebi591g00002 259 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Sebi591g00002 259 Pfam AP2 domain 43 93 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi591g00002 Sebi-Chr591 93407 95973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi591g00002 2 192 AP2-EREBP Transcription Factor Family AT5G51990 56.098 4.57e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi591g00002 AP2 2.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi591g00002 - - gmx:547622 301.982