Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi590g00018 ATGTTCGAGAAGCCATTAACCCCCAGTGACGTGGGAAAGCTAAACCGTCTCGTAATCCCGAAACAACACGCGGAGAAGTACTTCCCTTTGGGTGCTTCTGGTGGCGGCGGTGACTCGGGCGAGTGCAAGGGGCTGCTACTGAGTTTCGAGGACGAGTCAGGGAAGTGTTGGCGGTTCCGTTACTCGTATTGGAACAGCAGCCAGAGCTACGTTTTGACCAAAGGTTGGAGTCGTTACGTGAAGGACAAACGACTCGACGCAGGCGACGTCGTTTTGTTCCAGCGCCACCGTGTCGACGCTCAGAGGCTCTTCATTAACTGGAGGAGAAGGAAACCAAGTGGCACACCGCCGGCGCACGTTAGCAGGATGGTGGGACACGGCAAGGGCAGTAGTGATGGGTATAGCAATAGTAAGAATGAGGGTATTGCTGGTGGTGTGGGCGTGGGGTGGACCAGAGGGTTCTACTCTGCGCACCCTTATCCTACGCATCACCCCTTGCCATACCAACATGACTGTCTTCATGCAGGTCTCACTATCTCATCTCATCCTATATAA 555 0.5423 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGASGGGGDSGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRVDAQRLFINWRRRKPSGTPPAHVSRMVGHGKGSSDGYSNSKNEGIAGGVGVGWTRGFYSAHPYPTHHPLPYQHDCLHAGLTISSHPI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi590g00018 184 CDD B3_DNA 1 101 IPR003340 GO:0003677
Sebi590g00018 184 SMART B3_2 2 111 IPR003340 GO:0003677
Sebi590g00018 184 ProSiteProfiles B3 DNA-binding domain profile. 2 111 IPR003340 GO:0003677
Sebi590g00018 184 Gene3D - 1 116 IPR015300 -
Sebi590g00018 184 SUPERFAMILY DNA-binding pseudobarrel domain 1 110 IPR015300 -
Sebi590g00018 184 Pfam B3 DNA binding domain 2 110 IPR003340 GO:0003677
Sebi590g00018 184 MobiDBLite consensus disorder prediction 113 138 - -
Sebi590g00018 184 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 118 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi590g00018 Sebi-Chr590 195617 196171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi590g00018 1 110 RAV Transcription Factor Family AT3G11580 80.000 6.46e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi590g00018 B3 3.8e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi590g00018 K09287 - gmx:100818164 269.24