Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00126 ATGGCAGTGGCGAGTCGTAGTCCTATGGTTGCAACTCCACATGGGGGGGAAAGTGTACAAGATCAGGCTAATATTAATCCAGATGTGATTATTAATGACACAATATATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAAATTAAATCTGATATGGGCAATTCAGAACTCTCGAGGAAACAGAATATGCATCCTTCATGTTCACGTGCCAGCTACCATGATTCCCTTGATGGGTGCTAAATTTCCAGCAAGTGCACTGAAAGAGCAGGAAGTTGGAGCATACAGGGAAATTGAAAGGCAAGACATGCATAAGACTCTGGATGCCTATCTTCTTATCTGTCAAAAGATGGGGGTGAGGGCAGAGAAACTGCACATTGAAATGGATTGCATTGAAAAAGGAATTGTAGAACTCATCTCCCATCATAACATACAAAAGCTTGTAATGGGAGCAGCTTCTGATAAGTACCATTCTAGGGATGGCAATTTGGATAGAAGTAATGTAGAGGGCAAATCTCCTTTGGTGCAGCAAATTCCAAACTCTGAAGTTGGGCATTCCCCTAACTTGAGATCTCAATCTGTTTCATGGGGGCGAAATCAATGGGTGAAACTAGCTAATCCAGCTCAAGAGCTATTTCGTAGAGCAAGGTCTACCAATGAGGGACATGGAAGGAGCATTGCCTCTGTTTCTTCTTCAGATCAAGGATCTTCAACTACTACACCACAGAGCAAGTTGGGTTCTGATGAGTCAGATAGGGTGTCAAGATGGACTAATTCACCTTCAGTTTTCTCAATGTGCTCTGATAGTGAATCACCTTATTTGATTAGTGATGGCAGTGAGAATGCATTAGACTTTATCAGTTTGAGTGGCCTTTCTATTATTAAGGAGGAATATTCTCATCATTCATCACCTCCTAGTGTCCCGGATGGAGGAATGGAGGATAGTGTGTATGATCAACTTGAACAAGCAATGGCTGAGGCTGAGAATGCAAGAAGGGATGCATTTCAAGAAACTCTTAGGCGTGGCAAAGCTGAAAAAGATGGCATTGATGCTATACGCAGGACTAAAGCCGCTGAAATCTTGTATAAAGAAGAGCTGAAACTAAGGAAAGAGTTAGAAGAAGCACTAGTGAAAGCAAAAGAAGAAATTGATAATATGAAGAGCCAAAGAGACAAAGTTAATGAGGAACTCCAACTTGCACTACATCAGAAATCATCACTAAAAAATCAAATTGCATCAACTGAACTTACTATTAAGGATTTGGAGCAGAAGATTATGTCTGCTGTGGATCTATTACAAAGCTCCAAGAATGAACAAGATGACATCCAAATGCAGCGTGATAATGCATTGAAAGAGGCTGAGGAGTTAATGAGAAAATCACAAGGAGAGTTCTCAAGCACACATGTAGTGCCTCAACTCTTCTCAGAATTCTCTTTTTTAGAGATTGAAGAAGCAACAAGTAACTTCAATCCTTCCCTTAAGATTGGTGAAGGTGGATATGGAAGTATATTTAAAGGTACCCTGCGTCACACTGAGGTTGAGGTATTGAGCAAGTTAAGGCATCCTAATCTTATCACACTTATAGGAGCTTGCCCAGAGTCATGGACTCTTGTCTATGAATATTTACCCAATGGAAGCCTTGAAGATCGTCTCAACTGCAAGGATAACACACCTCCCTTATCATGGCAAACTCGGATTCACATTGCTGCAGAACTATGTTCTGCTCTTATTTTCCTCCATTCAAGTAAACCTCACAGCATAGTACATGGTGACTTAAAACCTTCCAACATTCTCCTTGATGCAAACCTTGTTAGCAAGCTTAGTGACTTTGGAATCTCTAGGATACTATCATGTGAAGAGGATTCAAGTAACAACATTTCACAGTTTTGGATGACTGTTCCAAAGGGAACATTTGTTTACATGGATCCTGAATTCCTTACTTCAGGTGAACTCACTCCAAAGTCAGATGTTTATTCATTTGGAATCATACTATTAAGATTGATAACTGGGAGACCAGCCTTGGGAATAATGAAGGAAGTGCAATATGCATTTCAAGGTGGAAAGCTGAAATCTCTGTTGGATCCTTTGGCTGGAGAATGGCCATTTGTGCAAGCTGAACAATTGGCTTGTTTGGCTTTGAGGTGTTGTGATATGAATAGGAAGAGCAGGCCAGACCTTCATTCAGATGTCTGGAAGATTCTGGAACCAATGAGGGATTCTTGTGGAGGCACAAACATCTTTGGACTTGGTTCTCAACAAGGACTCTGCCAACCTCCTTCATATTTTATTTGTCCAATCTTCCAGGAAGTTATGCAAGATCCACATGTGGCTGCAGATGGTTTCACCTATGAAGCTGAGGCTATAAGGGATGGCTGGAAAGTGGTCATGACACTTCACCAAGGACAAATTCTAGGCTTTTACATCTCAATCTTGTTCCCAACCATACTCTTCGCTATGCAATTCAGGACTGGCTTCAAAGTCACTGATCAAGCTTGTCATTTTTTCTTTTTCCCATTTTGA 2517 0.4096 MAVASRSPMVATPHGGESVQDQANINPDVIINDTIYVAVAKDVKDSKLNLIWAIQNSRGNRICILHVHVPATMIPLMGAKFPASALKEQEVGAYREIERQDMHKTLDAYLLICQKMGVRAEKLHIEMDCIEKGIVELISHHNIQKLVMGAASDKYHSRDGNLDRSNVEGKSPLVQQIPNSEVGHSPNLRSQSVSWGRNQWVKLANPAQELFRRARSTNEGHGRSIASVSSSDQGSSTTTPQSKLGSDESDRVSRWTNSPSVFSMCSDSESPYLISDGSENALDFISLSGLSIIKEEYSHHSSPPSVPDGGMEDSVYDQLEQAMAEAENARRDAFQETLRRGKAEKDGIDAIRRTKAAEILYKEELKLRKELEEALVKAKEEIDNMKSQRDKVNEELQLALHQKSSLKNQIASTELTIKDLEQKIMSAVDLLQSSKNEQDDIQMQRDNALKEAEELMRKSQGEFSSTHVVPQLFSEFSFLEIEEATSNFNPSLKIGEGGYGSIFKGTLRHTEVEVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTPPLSWQTRIHIAAELCSALIFLHSSKPHSIVHGDLKPSNILLDANLVSKLSDFGISRILSCEEDSSNNISQFWMTVPKGTFVYMDPEFLTSGELTPKSDVYSFGIILLRLITGRPALGIMKEVQYAFQGGKLKSLLDPLAGEWPFVQAEQLACLALRCCDMNRKSRPDLHSDVWKILEPMRDSCGGTNIFGLGSQQGLCQPPSYFICPIFQEVMQDPHVAADGFTYEAEAIRDGWKVVMTLHQGQILGFYISILFPTILFAMQFRTGFKVTDQACHFFFFPF 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00126 838 Coils Coil 312 336 - -
Sebi58g00126 838 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 46 151 - -
Sebi58g00126 838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 750 794 IPR013083 -
Sebi58g00126 838 ProSiteProfiles U-box domain profile. 756 787 IPR003613 GO:0004842|GO:0016567
Sebi58g00126 838 SUPERFAMILY Protein kinase-like (PK-like) 463 726 IPR011009 -
Sebi58g00126 838 CDD STK_N 34 158 - -
Sebi58g00126 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Sebi58g00126 838 MobiDBLite consensus disorder prediction 216 260 - -
Sebi58g00126 838 SMART serkin_6 488 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi58g00126 838 Pfam U-box domain 758 788 IPR003613 GO:0004842|GO:0016567
Sebi58g00126 838 SUPERFAMILY RING/U-box 753 789 - -
Sebi58g00126 838 Gene3D Transferase(Phosphotransferase) domain 1 545 743 - -
Sebi58g00126 838 PANTHER OS02G0152300 PROTEIN 35 791 - -
Sebi58g00126 838 CDD RING-Ubox_WDSUB1-like 758 791 - -
Sebi58g00126 838 Gene3D Phosphorylase Kinase; domain 1 467 511 - -
Sebi58g00126 838 Coils Coil 361 458 - -
Sebi58g00126 838 Gene3D Phosphorylase Kinase; domain 1 512 544 - -
Sebi58g00126 838 ProSiteProfiles Protein kinase domain profile. 452 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi58g00126 838 MobiDBLite consensus disorder prediction 220 260 - -
Sebi58g00126 838 Pfam Protein kinase domain 510 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00126 Sebi-Chr58 2221746 2230328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi58g00126 30 791 U-box Gene Family AT2G45910 51.195 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sebi58g00126 Pkinase 6.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00126 - - gmx:100807515 1004.59