Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00097 ATGAAAAAGAGAAGCGAAAAGAAAGGCGAGAAAGGCGAGAAAGGCGAATTTATTCACGGGTTCACACGAGCTTGTCCACTTGAAAAGCCTCATATACCCCTTCTTAACTCTTTCATGTGTCAGAAACCTCAAACTGAGAATAACATCAAAGGGGTACCAACTCATGGTGGACGCTACGTTCAGTACAATATCTATGGCAACCTCTTTGAGGTTTCCAACAAGTATGTTCCTCCAATTCGCCCTGTTGGCAGAGGCGCTTATGGTATTGTTTGTGCTGCTGTAAATGGTGAGACAGGCGAGGAGGTTGCCATTAAGAAGGTGATGTCCATTAAAGACATTATACGACCTCCACAGAAGGAGAACTTCAATGATGTTTACATTGTTTCTGAGTTAATGGACACAGATCTGCATCAAATAATACGTTCCAATCAGCCATTAACAGATGATCATTGTCGGGAACATCCTAAAGAGCCTAGAACATTGGAGACCGGATATCAGACAATGTATAGGTGGTGTTCATCCTACCTCACTTGTGGGGATTACACTACCTGTTGCACTGTATTGGCTTCCATATGGGCTCCAAGATATGTACATTCAGCAAATGTTTTGCATCGTGATCTAAAGCCTAGCAATTTGCTACTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGTCTGGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTTACTCGATGGTACCGAGCTCCCGAATTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGATATATGGTCTGTTGGTTGCATACTTGGTGAGATCATAACAAGACAACCCCTCTTTCCGGGCAAAGATTATGTTCATCAGCTGAGACTGATCACAGAGTTGATAGGTTCACCTGATGATGCTAGCCTTGGATTTCTACGCAGCGAAAATGCTCGTAGATACGTAAGACAGCTTCCACAATATCCAAAGAGAGACTTTTCTGCTAGATTTCCCAGTATGTCTGCTGGTGCTATTGATTTGCTAGAAAAGATGCTTGTCTTTGATCCAAACAAGCGCATTACAGTTGATGAGGCATTGTGCCACCCATACATGGCACCTCTCCATGATATCAATGAAGAACCTGTATGCGGCAAACCTTTCAGTTTTGACTTTGAGCAACCGTCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTGACCCACCAATTTACTGA 1245 0.4241 MKKRSEKKGEKGEKGEFIHGFTRACPLEKPHIPLLNSFMCQKPQTENNIKGVPTHGGRYVQYNIYGNLFEVSNKYVPPIRPVGRGAYGIVCAAVNGETGEEVAIKKVMSIKDIIRPPQKENFNDVYIVSELMDTDLHQIIRSNQPLTDDHCREHPKEPRTLETGYQTMYRWCSSYLTCGDYTTCCTVLASIWAPRYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQLPQYPKRDFSARFPSMSAGAIDLLEKMLVFDPNKRITVDEALCHPYMAPLHDINEEPVCGKPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPIY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00097 414 ProSitePatterns Protein kinases ATP-binding region signature. 82 106 IPR017441 GO:0005524
Sebi58g00097 414 SUPERFAMILY Protein kinase-like (PK-like) 65 396 IPR011009 -
Sebi58g00097 414 Pfam Protein kinase domain 195 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi58g00097 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Sebi58g00097 414 ProSiteProfiles Protein kinase domain profile. 76 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi58g00097 414 FunFam Mitogen-activated protein kinase 180 393 - -
Sebi58g00097 414 SMART serkin_6 76 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi58g00097 414 Gene3D Phosphorylase Kinase; domain 1 110 131 - -
Sebi58g00097 414 Gene3D Phosphorylase Kinase; domain 1 53 109 - -
Sebi58g00097 414 Gene3D Phosphorylase Kinase; domain 1 394 403 - -
Sebi58g00097 414 Gene3D Transferase(Phosphotransferase) domain 1 132 152 - -
Sebi58g00097 414 Gene3D Transferase(Phosphotransferase) domain 1 195 393 - -
Sebi58g00097 414 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 74 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00097 Sebi-Chr58 1764794 1769450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi58g00097 46 413 MAP Kinase Gene Family AT4G01370 70.707 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi58g00097 Pkinase 3.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00097 K20600 - gmx:100779469 602.438