Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi58g00094 ATGGTGTCCGTGAACCCTAACCCAGCTCAAGGCTTTTACTTCTTCGATCCTTCCAATATGGCCCTTCCCGGTGTCAACCCTCTTCCGGCGCCTCCTCCTCCCCAGCCTCCCGCTCCCGGCGCTGCCACCGCTTCCACTACCGCCGAGGATCCGAGTAAGAAGATCCGAAAACCCTATACGATTACCAAGTCCAGGGAGAGCTGGACCGAGCAGGAACACGACAAGTTTCTAGAAGCTCTCCAATTATTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCTCCTCGGCCAAAGAGAAAAGCTGCACACCCATACCCTCAAAAAGCTCCCAAAATCGCTCCTACTGTATCCCAAGTCACAGGGCCATTGCAATCTTCATCGGCTTTTATTGAACCTGCATACATTTATACCCCAGATTCATCATCTGTACTTGGAACACCAGTTACTAGTGTGCCTTTATCATCTTGGAATTATAATGCTATACCACCAGCCAGTGTGCCACAAATGGCTAGAGATGACATGGGATTGACAGGAGCTGGACAAGCCGTTCCTCTTAATTGTTGCTATAGCAGCAGTAATGAGAGCATCCATCGAACTTGGCCAAGTAGCAAAGGGATTAATCAACGTGACCAGGACCAGCCAATTAAAGGTTGGAATGCTTCTTCATCTCTAATATGA 768 0.4688 MVSVNPNPAQGFYFFDPSNMALPGVNPLPAPPPPQPPAPGAATASTTAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKIAPTVSQVTGPLQSSSAFIEPAYIYTPDSSSVLGTPVTSVPLSSWNYNAIPPASVPQMARDDMGLTGAGQAVPLNCCYSSSNESIHRTWPSSKGINQRDQDQPIKGWNASSSLI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi58g00094 255 PANTHER SWI/SNF COMPLEX-RELATED 43 192 - -
Sebi58g00094 255 MobiDBLite consensus disorder prediction 23 60 - -
Sebi58g00094 255 FunFam protein REVEILLE 6 isoform X1 67 115 - -
Sebi58g00094 255 NCBIfam myb-like DNA-binding domain, SHAQKYF class 63 112 IPR006447 GO:0003677
Sebi58g00094 255 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
Sebi58g00094 255 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Sebi58g00094 255 SMART sant 64 112 IPR001005 -
Sebi58g00094 255 MobiDBLite consensus disorder prediction 116 135 - -
Sebi58g00094 255 CDD SANT 67 110 IPR001005 -
Sebi58g00094 255 Pfam Myb-like DNA-binding domain 65 110 IPR001005 -
Sebi58g00094 255 ProSiteProfiles SANT domain profile. 63 116 IPR017884 -
Sebi58g00094 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Sebi58g00094 255 MobiDBLite consensus disorder prediction 24 40 - -
Sebi58g00094 255 Gene3D - 68 115 - -
Sebi58g00094 255 MobiDBLite consensus disorder prediction 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi58g00094 Sebi-Chr58 1728340 1731382 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi58g00094 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi58g00094 - - gmx:778090 382.489